Gene EcolC_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3719 
Symbol 
ID6068714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4070347 
End bp4072104 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content41% 
IMG OID641603136 
Productrestriction modification system DNA specificity subunit 
Protein accessionYP_001726656 
Protein GI170021702 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG AAAAGCTGAT CGTTGATCAT ATGGAAACCT GGACCTCGGC GTTGCAAACC 
CGTTCCACCG CCGGGCGCGG CAGTTCCGGA AAAATTGATT TATATGGCAT TAAGAAATTA
CGTGAGCTGA TTCTGGAACT GGCTGTGCGC GGTAAACTGG TGCCGCAGGA CCCGAACGAT
GAACCGGCGT CGGAGCTGCT GAAGCGTATT GCGGCGGAAA AAGCGGAGCT GGTGAAGCAA
GGTAAAATTA AAAAGCAAAA ACCGCTGCCG GAAATTAGCG AGGAAGAGAA GCCGTTTGAA
TTGCCGGAGG GATGGGAGTG GGCAAGAATC AATGACATAG CTTCATTTAC AAATGGATAT
GCATTTAAGA GTAGCGAGTT TCAGAATTCT GGAGTTGGTA TAGTCAAAAT AGGTGATATC
GACAGTTCCG GGTTTATTTC TACCGCAGGT ATGTCATATG TTAGTGAAAA AAAAATAAAT
GTATTACCCG AAGAGATGAG GGTTAATCCT GGTGATATGG TTATTGCTAT GTCTGGAGCA
ACAACAGGGA AACTAGGGTT TAATAAAACA AAAAGCACGT TCCTTCTAAA TCAACGAGTC
GGTAAAATTG TGACTTACTC AGTTGACAAA GAGTTCATTT ATCACTATTT ATCTACAAGA
ATTGAAGAAA ATCTATCTAT TTCTTTAGGT AGTGCAATAC CAAATATTAG CACAGCACAA
ATAAACAATA TCATTATTCC AATCCCCCCA TCAGATGAAC AAGTTAAAAT AATAGCCAGA
GTTAAGTTAC TTATTTCCCT ATGCGACCAA CTGGAACAAC AATCCCTGAC CAGTCAGGAC
GCACATCAGC AACTGGTTGA AACCCTATTG GGAACACTTA CAGACAGCCA AAACGCCGAG
GAACTGGCTG AAAACTGGGC GCGTATTAGC GAGCATTTCG ACACACTATT TACCACAGAA
GCCAGCGTGG ATGCGTTAAA ACAGACCATT CTGCAACTGG CCGTAATGGG TAAACTTGTG
CCGCAGGATC CGAATGATGA ACCAGCCTCT GAACTGCTCA AACGAATTGC GCAGGAAAAA
GCTCAACTGG TGAAAGAAGG AAAAATAAAA AAACCGTTGC CGCCAATTAG CGATGAGGAA
AAACCGTTTG AACTTCCGGA AGGGTGGGAG TGGTGTTTAT TTGAAGATAT TATTGATATT
CAAAGTGGTA TCACTAAAGG AAGAAATTTA TCAAATAGAA CTTTGGTAAA AGTTCCTTAT
TTACGTGTTG CAAACGTCCA ACGCGGATAT CTTGATCTTA CGGAAATTAA ACAGATTGAA
ATCCCTATTG AGGAAAAAGA AAAATATCAA GTAGTCAAGG GAGATTTATT GATCACAGAA
GGCGGCGACT GGGATACAGT CGGGAGAACT ACAGTATGGT GTCATGACTG GTATATAGCA
AATCAAAACC ATGTATTCAA AGGACGAAAT ATAGGGCAAT ATGTTGATCC ATATTGGTTA
GAAACATATA TGAATAGCCC ATTCTCAAGA CAATATTTTG CTAACGCAAG TAAGCAAACC
ACTAATTTAG CTTCTATTAA TAAAACCCAG CTCAGAGGTT GTCCTGTTGC TATTCCTCCT
AGCTCAGAAG CAAAAAAAAT AATGAGTAAA CTACATATTT TTTATAAACT ATGTGAAGAA
TTAAAGAATC ATATCCAATC CGCCCAGCAA ACCCAACTGC ACCTTGCAGA TGCACTCACT
GACGCGGCGG TAAACTAA
 
Protein sequence
MSVEKLIVDH METWTSALQT RSTAGRGSSG KIDLYGIKKL RELILELAVR GKLVPQDPND 
EPASELLKRI AAEKAELVKQ GKIKKQKPLP EISEEEKPFE LPEGWEWARI NDIASFTNGY
AFKSSEFQNS GVGIVKIGDI DSSGFISTAG MSYVSEKKIN VLPEEMRVNP GDMVIAMSGA
TTGKLGFNKT KSTFLLNQRV GKIVTYSVDK EFIYHYLSTR IEENLSISLG SAIPNISTAQ
INNIIIPIPP SDEQVKIIAR VKLLISLCDQ LEQQSLTSQD AHQQLVETLL GTLTDSQNAE
ELAENWARIS EHFDTLFTTE ASVDALKQTI LQLAVMGKLV PQDPNDEPAS ELLKRIAQEK
AQLVKEGKIK KPLPPISDEE KPFELPEGWE WCLFEDIIDI QSGITKGRNL SNRTLVKVPY
LRVANVQRGY LDLTEIKQIE IPIEEKEKYQ VVKGDLLITE GGDWDTVGRT TVWCHDWYIA
NQNHVFKGRN IGQYVDPYWL ETYMNSPFSR QYFANASKQT TNLASINKTQ LRGCPVAIPP
SSEAKKIMSK LHIFYKLCEE LKNHIQSAQQ TQLHLADALT DAAVN