Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2256 |
Symbol | |
ID | 6067050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2486401 |
End bp | 2487351 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641601660 |
Product | PaaX family transcriptional regulator |
Protein accession | YP_001725219 |
Protein GI | 170020265 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.203735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC TTGATACTTT TATCCAACAT GCTGTAAACG CTGTTCCGGT CAGTGGCACA TCTTTGATCT CCTCTCTGTA TGGTGATTCG CTTTCCCATC GTGGTGGTGA AATCTGGCTT GGTAGTCTGG CTGCTTTGCT GGAAGGGCTG GGATTTGGTG AGCGTTTCGT GCGCACCGCT TTGTTTCGTC TTAATAAAGA AGGCTGGCTG GATGTTTCCC GCATCGGGCG ACGCAGTTTC TATAGCCTCA GTGATAAAGG CTTGCGCCTG ACGCGACGGG CAGAAAGTAA AATTTATCGC GCAGAGCAAC CTGCATGGGA TGGTAAATGG CTCCTGTTGC TCTCGGAAGG TTTAGATAAA GCGACGCTGG CTGATGTCAA AAAGCAGTTG ATCTGGCAAG GTTTTGGCGC ACTGGCACCC AGCCTGATGG CATCGCCGTC GCAAAAACTG GCGGATGTAC AGACACTTTT GCATGAAGCG GGGGTGGCGG ATAACGTGAT TTGTTTTGAA GCGCAAATAC CACTGGCGCT TTCTCGCGCA GCACTGCGTG CCAGAGTAGA AGAGTGCTGG CATTTAACTG AACAAAATGC CATGTACGAA ACCTTTATTC AGTCATTCCG CCCGCTGGTG CCGCTGTTAA AAGAGACGGC AGACGAGTTA ACCCCGGAGC GTGCATTTCA TATTCAGCTT TTACTGATCC ATTTTTATCG CCGTGTCGTC CTTAAAGACC CATTGTTGCC GGAGGAGTTG CTTCCGGCTC ACTGGGCAGG GCATACGGCG CGTCAGCTGT GTATCAACAT TTATCAGCGC GTAGCGCCTG CTGCTTTAGC GTTCGTTAGT GAAAAAGGTG AAACCTCAGT CGGTGAACTG CCTGCGCCGG GAAGCCTGTA TTTTCAACGT TTTGGCGGCT TGAATATTGA ACAGGAGGCG TTATGCCAAT TTACCAGATA G
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Protein sequence | MSKLDTFIQH AVNAVPVSGT SLISSLYGDS LSHRGGEIWL GSLAALLEGL GFGERFVRTA LFRLNKEGWL DVSRIGRRSF YSLSDKGLRL TRRAESKIYR AEQPAWDGKW LLLLSEGLDK ATLADVKKQL IWQGFGALAP SLMASPSQKL ADVQTLLHEA GVADNVICFE AQIPLALSRA ALRARVEECW HLTEQNAMYE TFIQSFRPLV PLLKETADEL TPERAFHIQL LLIHFYRRVV LKDPLLPEEL LPAHWAGHTA RQLCINIYQR VAPAALAFVS EKGETSVGEL PAPGSLYFQR FGGLNIEQEA LCQFTR
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