| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1678 |
|---|
| Symbol | |
|---|
| ID | 6066273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1880483 |
|---|
| End bp | 1881334 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641601092 |
|---|
| Product | chaperone protein HchA |
|---|
| Protein accession | YP_001724657 |
|---|
| Protein GI | 170019703 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0530592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.121369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTC AAACAAGTAA AAATCCGCAG GTCGATATTG CTGAAGATAA TGCATTCTTC
CCTTCAGAAT ATTCGCTTAG CCAATATACC AGTCCTGTCT CTGATCTTGA TGGCGTGGAC
TATCCAAAAC CGTATCGCGG TAAACATAAA ATTCTGGTGA TCGCCGCGGA CGAACGTTAT
TTGCCGACCG ATAACGGGAA ACTGTTCTCG ACCGGTAACC ATCCGATTGA AACGTTGCTG
CCGTTGTATC ATCTCCATGC TGCAGGTTTC GAATTCGAAG TGGCGACCAT TTCCGGTCTG
ATGACCAAGT TTGAATACTG GGCTATGCCG CACAAAGATG AAAAAGTAAT GCCATTCTTT
GAGCAGCATA AATCGTTGTT CCGCAATCCG AAGAAACTCG CGGATGTTGT CGCCAGCCTC
AACGCTGATA GCGAATATGC AGCAATCTTT GTTCCTGGTG GTCATGGCGC ACTTATTGGT
TTACCTGAAA GCCAGGACGT AGCTGCCGCT TTACAGTGGG CAATCAAAAA TGACCGTTTC
GTTATCTCCC TTTGCCACGG CCCGGCGGCT TTTCTGGCGC TTCGCCACGG CGATAACCCA
CTGAATGGTT ATTCCATTTG CGCATTCCCA GACGCCGCAG ACAAACAAAC GCCAGAGATA
GGCTATATGC CGGGTCATCT CACCTGGTAC TTCGGCGAAG AGCTGAAGAA AATGGGCATG
AACATTATTA ATGACGACAT CACTGGGCGA GTACATAAGG ACCGTAAAGT TCTCACCGGC
GACAGTCCTT TCGCAGCGAA TGCGTTGGGT AAACTGGCGG CGCAGGAAAT GCTGGCAGCT
TATGCGGGTT AA
|
|---|
| Protein sequence | MTVQTSKNPQ VDIAEDNAFF PSEYSLSQYT SPVSDLDGVD YPKPYRGKHK ILVIAADERY
LPTDNGKLFS TGNHPIETLL PLYHLHAAGF EFEVATISGL MTKFEYWAMP HKDEKVMPFF
EQHKSLFRNP KKLADVVASL NADSEYAAIF VPGGHGALIG LPESQDVAAA LQWAIKNDRF
VISLCHGPAA FLALRHGDNP LNGYSICAFP DAADKQTPEI GYMPGHLTWY FGEELKKMGM
NIINDDITGR VHKDRKVLTG DSPFAANALG KLAAQEMLAA YAG
|
|---|
| |