Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1545 |
Symbol | |
ID | 6065408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1711346 |
End bp | 1712164 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641600962 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001724532 |
Protein GI | 170019578 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.883984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCTCTC TATTATGCGC TCTTGGGCTA ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCGC ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC TGGCAGCGGG TGGCAAAAAT GCGCGACAAC GGTATCCGCT TACAGTTTGC TTTTATTAAG GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC GAAAATGGCC TGCTGCGTGG GGCGTATCAT TATTTCTCCC CGTCGGTATC CGCTTCAGTT CAGGCGAGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCGGTACTG GACGTAGAAG AGCGAGGAAA ATTATCGGCA AAAGAATTAC GCAAGAGGGT AAGTCAGTGG CTAAAAATGG TCGAAAAAAG TACGGGGAAA AAGCCGATTA TTTACTCAGG AGCCGTTTTT TATCACACGA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT CAACGTCGTC CGGACAATGA CGGAATGGCC TGGCGCTTCT GGCAGCATTC CGACCGTGGA CAGGTAGATG GCATCAATGG TCCGGTGGAT TTTAATGTAT TTAATGGCAC GGTGGAGGAG TTGCAGGCAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
|
Protein sequence | MQLRITSRKK LTSLLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIR IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR ENGLLRGAYH YFSPSVSASV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW LKMVEKSTGK KPIIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG QVDGINGPVD FNVFNGTVEE LQAFVDGIKE TP
|
| |