Gene EcolC_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1314 
Symbol 
ID6068458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1445226 
End bp1445789 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID641600736 
Productfimbrial protein 
Protein accessionYP_001724307 
Protein GI170019353 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TTGTTAAAAC AGCTATTGCT GCGGCAATGG TGATGGGCGT GTTCACCTCT 
ACGGCAACAA TCGCTGCGGG TAACAACGGT ACTGCACGTT TTTACGGCAC CATTGAAGAC
TCAGTGTGTT CTATTGTTCC GGACGATCAC AAACTGGAAG TTGATATGGG TGATATCGGT
GCCGAAAAAC TGAAAAACAA CGGCACCACC ACGCCGAAAA GTTTCCAGAT TCGCCTGCAA
GATTGCGTAT TTGATACTCA GGAAACAATG ACCACTACCT TCACCGGCAC CGTTTCTTCT
ACAAATAGCG GCAATTATTA CACCATTTTC AATACCGATA CCGGTGCGGC ATTTAACAAC
GTTAGCCTGG CAATCGGTGA CTCTCTGGGG ACCTCTTACA AAAGTGGCAT GGGTATCGAC
CAGAAAATCG TGAAAGACAC TGCCACTAAT AAAGGCAAAG CGAAGCAGAC ACTGAACTTT
AAAGCCTGGC TGGTCGGCGC AGCTGATGCG CCAGATCTGG GTAATTTCGA AGCAAATACC
ACCTTCCAGA TTACTTACCT GTAA
 
Protein sequence
MSKFVKTAIA AAMVMGVFTS TATIAAGNNG TARFYGTIED SVCSIVPDDH KLEVDMGDIG 
AEKLKNNGTT TPKSFQIRLQ DCVFDTQETM TTTFTGTVSS TNSGNYYTIF NTDTGAAFNN
VSLAIGDSLG TSYKSGMGID QKIVKDTATN KGKAKQTLNF KAWLVGAADA PDLGNFEANT
TFQITYL