Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0150 |
Symbol | |
ID | 6106524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | + |
Start bp | 118542 |
End bp | 119474 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641614889 |
Product | Tn1721 transposase |
Protein accession | YP_001740030 |
Protein GI | 170650893 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.751061 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTCAT GTGCAGCTCC ATCAGCAAAA GGGGATGATA AGTTTATCAC CACCGACTAT TTGCAACAGT GCCAGCCGGG ACGGCTGTTC TATACCCATA TCTCCGACCA GTACGCGCCG TTCAGCACCC GCGTGGTGAA TGTCGGCGTC CGCGATTCCA CCTATGTGCT CGACGGCCTG CTGTACCACG AGTCCGACCT GCGGATCGAG GAGCACTACA CCGACACGGC CGGCTTCACC GATCACGTCT TTGCCCTGAT GCACCTGCTA GGCTTCCGCT TCGCGCCGCG CATCCGCGAC CTCGGCGAAA CCAAGCTGTA CGTGCCGCAG GGCGTGCAAG CCTACCCGAC GTTGCGCCCG CTGATCGGCG GCACCCTGAA CATCAAGCAC GTGCGTGCCC ACTGGGACGA CATCCTGCGC CTGGCCAGCT CGATCAAGCA GGGCACCGTC ACCGCCTCGC TGATGCTGCG CAAGCTCGGC AGCTACCCGC GCCAGAACGG ACTGGCCGTG GCCCTGCGCG AGCTGGGCCG GATCGAGCGC ACGCTGTTCA TCCTGGACTG GCTGCAAAGT GTTGAACTGC GCCGCCGCGT GCATGCCGGC CTGAACAAAG GTGAGGCGCG CAACTCGCTG GCCAGGGCGG TGTTCTTCAA CCGCCTTGGG GAAATCAGGG ATCGGAGCTT CGAGCAGCAG CGCTACCGGG CCAGCGGCCT CAACCTGGTG ACGGCGGCTA TCGTGCTGTG GAACACGGTG TACCTGGAAC GCGCCACCCA GGGGTTGGTC GAGGCCGGCA AGCCGGTGGA CGGCGAGCTG CTGCAATTCC TGTCGCCGCT GGGCTGGGAG CACATCAACC TAACCGGCGA TTACGTCTGG CGGCAGAGCC GCAGACTGGA AGACGGGAAG TTTCGGCCCT TACGGATGCC CGGAAAACCT TAG
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Protein sequence | MGSCAAPSAK GDDKFITTDY LQQCQPGRLF YTHISDQYAP FSTRVVNVGV RDSTYVLDGL LYHESDLRIE EHYTDTAGFT DHVFALMHLL GFRFAPRIRD LGETKLYVPQ GVQAYPTLRP LIGGTLNIKH VRAHWDDILR LASSIKQGTV TASLMLRKLG SYPRQNGLAV ALRELGRIER TLFILDWLQS VELRRRVHAG LNKGEARNSL ARAVFFNRLG EIRDRSFEQQ RYRASGLNLV TAAIVLWNTV YLERATQGLV EAGKPVDGEL LQFLSPLGWE HINLTGDYVW RQSRRLEDGK FRPLRMPGKP
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