| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0140 |
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| Symbol | vagC |
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| ID | 6106521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | + |
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| Start bp | 108741 |
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| End bp | 108971 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641614879 |
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| Product | plasmid maintenance protein VagC |
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| Protein accession | YP_001740020 |
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| Protein GI | 170650885 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4456] Virulence-associated protein and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAACCG TATCGATATT CAAAAATGGC AACAACCGCG CCATCCGTCT GCCTCGTGAT
CTGGATTTTG AGGGGGTGAG CGAGCTCGAG ATCGTCCGGG AAGGGGACAG CATCATCCTG
CGCCCCGTCC GGCCAACCTG GGGATCATTC CTAGAGTACG AAAAAGCCGA TCCAGATTTT
ATGGCGGAGC GCGAGGATGT TGTCAGCGAC GAAGGGCGAT TTAACCTGTG A
|
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| Protein sequence | MRTVSIFKNG NNRAIRLPRD LDFEGVSELE IVREGDSIIL RPVRPTWGSF LEYEKADPDF
MAEREDVVSD EGRFNL
|
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