Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_A0138 |
Symbol | |
ID | 6106568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010488 |
Strand | - |
Start bp | 107266 |
End bp | 108165 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641614877 |
Product | hypothetical protein |
Protein accession | YP_001740018 |
Protein GI | 170650835 |
COG category | [K] Transcription |
COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTG ATATCTTTCA GTCACTTAAA AATTGCGTAT TCGACCTTCA GCGCGCTGAC GTTCAGAACT ATCAGCAACC TCTTAAGCAA TTGGCCCGGC TCTTGAACTC AGAGAATCTG CAGTCAGTTA ATGCACATCT GACCCGCAAT GTTGAACTTG ATACCTTTCT GGCCAGGAGT GAAGATACTG AATCCAGCAT GGCTGGTTCC GCTGTTCTAC AGTGGCCTGA TGAGCCCGCT GATATTTTGG GCCTGAAGTT GCTGCTGATC GAGAAAATGG CAGACGATAA CAATTTTTCC TTTAATTTCT GTCATACATT TTTCTATGAT CGAAACATTA TTGAATCCAT TCGAAAATTC ACGTCGTCAT TAGTTGCCCC GTTCGTGCGC GATTACCAGT TGTATGTGGA AAACCAACAC GATCCTGAGC CTGCAGTGTT TCGGCCGGTT TCCCGAAAAA TTTTTATTGT TCATGGCCAT GATAATGATG CCCTTCAGTC TGTTGCCCGT TTTATATCCC GGATAGGTCT TGAGGAAATC ATTCTTTCAG AACGTCCTGA CGGCTCCAGG ACGATTATCG AGAAATTTGA AGCAGAGTCA GGGGATGTCA GTTTTGCCAT CGTGCTGATG ACGCCCGACG ATAGCGGCAG TGCTCTGGCA TCTGAAAGCA CACGTCTCCG CGCACGCCAG AATGTCCTGT ATGAGCTCGG ATATTTCGCC GGGAAGCTTG GACGCGGGAA AGTACTTGTA CTCAGGAAGG GAGATATCGA AATCCCTTCA GATCTTGCCG GGGTTCTCTA TACCGAGCTT GATGAGCATG GTGGATGGAA ACGCAAACTG CTGAGTGAGC TTGCGTATGC CGGTGTTCCT TTTGACAAGG ATAAAGCATT AAGCGCCTGA
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Protein sequence | MAIDIFQSLK NCVFDLQRAD VQNYQQPLKQ LARLLNSENL QSVNAHLTRN VELDTFLARS EDTESSMAGS AVLQWPDEPA DILGLKLLLI EKMADDNNFS FNFCHTFFYD RNIIESIRKF TSSLVAPFVR DYQLYVENQH DPEPAVFRPV SRKIFIVHGH DNDALQSVAR FISRIGLEEI ILSERPDGSR TIIEKFEAES GDVSFAIVLM TPDDSGSALA SESTRLRARQ NVLYELGYFA GKLGRGKVLV LRKGDIEIPS DLAGVLYTEL DEHGGWKRKL LSELAYAGVP FDKDKALSA
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