| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0096 |
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| Symbol | |
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| ID | 6106529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 70340 |
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| End bp | 71080 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641614841 |
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| Product | site-specific recombinase |
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| Protein accession | YP_001739982 |
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| Protein GI | 170650826 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.000182797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000000259535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAATG TCATTCCCCT GCAGAATTCA CCTGAACGCG TCTCCCTGTT ACCCATTGCG
CCGGGGGTGG ATTTTGCAAC AGCGCTCTCC CTGAGAAGAA TGGCCACTTC CACGGGGGCC
ACACCGGCCT ACCTGCTGGC CCCGGAAGTG AGTGCCCTTC TCTTCTATAT GCCGGATCAG
CGTCACCATA TGCTGTTCGC CACCCTCTGG AATACCGGAA TGCGTATTGG CGAAGCCCGG
ATGCTGACGC CGGAATCATT TGACCTGAAT GGAGTAAGAC CGTTTGTGCG GATCCTGTCC
GAAAAAGTGC GTGCGCGACG CGGACGCCCG CCAAAAGATG AAGTGCGCCT GGTTCCGCTG
ACAGATATAA GCTATGTCAG GCAGATGGAA AGCTGGATGA TCACCACCCG GCCCCGTCGT
CGTGAACCAT TATGGGCCGT GACCGACGAA ACCATGCGCA ACTGGCTGAA GCAGGCTGTC
AGACGGGCCG AAGCTGACGG AGTACACTTT TCGATTCCGG TCACACCACA CACCTTCCGG
CACAGCTATA TCATGCACAT GCTCTATCAC CGCCAGCCCC GGAAAGTCAT CCAGGCACTG
GTTGGTCACA GGGATCCACG TTCGATGGAG GTTTATACCA GAGTGTTTGC ACTGGATATG
GCTGCCACGC TGGCAGTGCC TTTCACAGGT GACGGGCGGG ATGCTGCGGA GATCCTGCGT
ACACTGCCTC CCCTGAGGTG A
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| Protein sequence | MNNVIPLQNS PERVSLLPIA PGVDFATALS LRRMATSTGA TPAYLLAPEV SALLFYMPDQ
RHHMLFATLW NTGMRIGEAR MLTPESFDLN GVRPFVRILS EKVRARRGRP PKDEVRLVPL
TDISYVRQME SWMITTRPRR REPLWAVTDE TMRNWLKQAV RRAEADGVHF SIPVTPHTFR
HSYIMHMLYH RQPRKVIQAL VGHRDPRSME VYTRVFALDM AATLAVPFTG DGRDAAEILR
TLPPLR
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