Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4831 |
Symbol | |
ID | 6144893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4936987 |
End bp | 4939101 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641619635 |
Product | ATP-dependent DNA helicase UvrD |
Protein accession | YP_001746742 |
Protein GI | 170681239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.366653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTGC AAACGCCCAA GGTGGCACTT TCTGATGGTT TTCTGGGCGC ATTCGCGCGG ATCCCAAAAG CACAGCAAAA AAAGGTGCAG GAATTCATCT CCAAATTCCG TCAGGACCCG ACCAGTAATG GACTTAACTA TGAAAAGATC CACGATGCGC GCAGTAAAAA TGTCCATTCG GTGCGAATCG ATCAAACTTA TCGCGGCATT GTTCTGAAAC CTGAACAGGG TGCCCTGTAT ATGCTGATGT GGGTGGATAA ACACGACGAA GCATACGACT GGGCGCGGCG GCATGATTGT TCAATTCACC CGGTTACCGG CGCAATTCAG GTTATTGATA TTAGCTATAT CAAACCGGCA GCGGAAACAG TGGTTGATAA ACCGAAACTC TTCGCAGCTT ACAGCGCGGA ACAGATTCTG GCCCTGGGTG TGCCGCCTGT CTTTATTGAT CAGGTGATGG CGCTTACCGA TGAAGCCGGG CTTAATCAAC TTGAAAGCAT AATGCCAGCA GAAGCCTGGG AACCCCTGCA TTGGCTGGCA GAAGGGCTGG ATTACCAGGA AGTGCTGGAA GAGTTTAACG ATCATCGTGA TGAGCCTGTT GATACCAACG ACTTTATGGA GGCGATTGAA CGAAGTAAAC GTCGCTTCTA TGTCGTTGAA AATGAACAGG AGCTGTTGCA GATGCTTAAT GCGCCTTTAG AAAAATGGCG TGTATTTCTG CATCCGAGCC AGCGAAAACT GGTGGAGTCG CCCGCTAATG GTCCGGTACG AGTACTGGGC GGTGCAGGTA CAGGGAAAAC GGTTGTTGCA ATGCACCGTG CGCGGTGGTT ATCTCAGCGT CTGGTAGATA AACCCGGTAA GAAGGTACTT TTCACGACCT TTACGCGTAA CCTGGCGGCA GATATTCGCG CTAATCTCCA GCGGTTGTGT ACGCGAGAAG AGATGGCGCG TATTGACGTC GTTAACATTG ATGCCTGGAT GAGCGACCAA CTAAAACGCC ACGGTTATGA TTTCCGCGTG GTATACGACA GCGATGAAGG GCGACGTAAA TGCTGGAACT ATGCCTTGCA GCAGGCACCT GCCGAACTGG GGCTACCTGA CAATTTCTAT GCTGAAGAGT GGCAACGCGT TGTCCAGCCA AATGCGGTTT ACACCCGGGA GGAATACCTC AAAGTCAGCC GGGTTGGACG TGGTACAGCG TTATCCCGTA TTCAACGGGC GAAAATCTGG CCAGTTTTCG AAGAATTCAG AGCACAAATG GCGCGTGCCA AACTGCGCGA AATGGGCGAT GCCATGCATG AGGCTATTGT TCTGTTTAAA GAAAAGCAGG TCCAACTACC TTATAGCAGT ATTGTCGTCG ATGAAGCTCA AGATATCGGT GCCCCGGCAT TTACTCTTAT TCGCAGCCTG GTTCCCGAGT CGCCCAACGA TCTGTTTATT GTCGGGGATG GGCATCAGCG TATTTATCGC AATAAGGTCG TTCTTGGTCA GTGTGGTATT AACGTCCGTG GTCGTCGCAG TAAAAAATTG AAGATTAACT ATCGGACCAC AGAAGAGACG CGTCAATTTG CTGTTGGGCT GTTAACTGGT GTGAAGGTTG ATAACCTCGA TGGCGAAGCG GATACCAGTA ATGATTATTT GTCATTACTG CACGGGGAAA AGCCCATGAT TACGCATGCG GCAGATTTCA AAGAAGAGGC TGCAACACTC GTCAAGCAAA TTCAGGCATT GCTGGCGAAT CAGGTTCGTT CTCAGGATAT CTGCATTACT GCGCGTACTA AACATGCTTG CGACCGCTAC GCATCAGCAC TCAATGACGC CGGAATTGAG ACATTTAATT TAGGCAATGA TAGCGGTGAC AGCGATGCAC GCCCAGGCGT GCGAGTTGCA ACGATGCACC GTATTAAAGG GCTTGAGTTC CAGTATGTGT TCCTGGTGGG GATTAACGAA GGCGTTGTGC CGGAAATAAA AGCATTAGCA TCCGATGATC CCGTTGAACA GCGTGATGCA TTATTTAATG AGCGCGCGTT ACTGCATGTG GCTGCAACCC GTGCCGTAAA AGGGCTGTTT GTTTCATCAT CTGGTATCCC TAGTCCGCTA TTAGTGGCTG ATTGA
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Protein sequence | MTVQTPKVAL SDGFLGAFAR IPKAQQKKVQ EFISKFRQDP TSNGLNYEKI HDARSKNVHS VRIDQTYRGI VLKPEQGALY MLMWVDKHDE AYDWARRHDC SIHPVTGAIQ VIDISYIKPA AETVVDKPKL FAAYSAEQIL ALGVPPVFID QVMALTDEAG LNQLESIMPA EAWEPLHWLA EGLDYQEVLE EFNDHRDEPV DTNDFMEAIE RSKRRFYVVE NEQELLQMLN APLEKWRVFL HPSQRKLVES PANGPVRVLG GAGTGKTVVA MHRARWLSQR LVDKPGKKVL FTTFTRNLAA DIRANLQRLC TREEMARIDV VNIDAWMSDQ LKRHGYDFRV VYDSDEGRRK CWNYALQQAP AELGLPDNFY AEEWQRVVQP NAVYTREEYL KVSRVGRGTA LSRIQRAKIW PVFEEFRAQM ARAKLREMGD AMHEAIVLFK EKQVQLPYSS IVVDEAQDIG APAFTLIRSL VPESPNDLFI VGDGHQRIYR NKVVLGQCGI NVRGRRSKKL KINYRTTEET RQFAVGLLTG VKVDNLDGEA DTSNDYLSLL HGEKPMITHA ADFKEEAATL VKQIQALLAN QVRSQDICIT ARTKHACDRY ASALNDAGIE TFNLGNDSGD SDARPGVRVA TMHRIKGLEF QYVFLVGINE GVVPEIKALA SDDPVEQRDA LFNERALLHV AATRAVKGLF VSSSGIPSPL LVAD
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