| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4307 |
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| Symbol | |
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| ID | 6147078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4408933 |
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| End bp | 4409913 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641619128 |
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| Product | phage integrase family site specific recombinase |
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| Protein accession | YP_001746252 |
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| Protein GI | 170680409 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0756066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.00146275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAATTA AGAAGCTCGA TGATGGACGC TATGAAGTGG ACATTAGACC TCGCGGTCGC
GACGGAAAAC GCATCCGCAG GAAATTTGAA AGAAAAGCTG AGGCTGTAGC ATTTGAGCGA
TACACAATCG CCTACGCCAG CCAGAAAGAA TGGGCAGGTC AGCGAGCAGA TCGCAGAACT
TTGAGTGAGT TGCTGAACAT CTGGTGGAAA TATCACGGGC AAAACCACGA GCATGGAACA
AAAGAGTTTA ATCATCTGCT CAAAACCATC AGCGGCATAG GTGATATACC AGTGAGCCGG
ATGAGCAAAA GAGCTTTGAT GGATTATCGT TCCATGCGAC TACGTGATGG TATCAGTGCC
GCAACGATAA ACCGTGACAT GTACCGATTA TCCGGCATGT TCACAAAATT AATTCAATTG
GATGAATTTT CCGGGCAACA CCCAATTCAC GGACTGCCGC CACTGGCGGA GGCCAACCCT
GAAATGACGT TCCTGGAAAA AGCAGAAATC GAAAAACTGT TAAATGTTTT GGATGGTGAT
GACTTACTTG TCGCACTTTT ATGTCTGAGC ACTGGAGGAA GATGGACGGA AGTTGCCACG
CTAAAACCAG CACAGATTAC AAATTGCAGG GTTACCTTCC TGAAAACCAA AAACGGTAAA
AAGCGAACCG TGCCGATTTC TGAGGAACTG GAGAAAAAAG TTAAAGAGGA GGCCAGCGCT
AAATTATTCA AAGTTGATTA TGAGAAGTTT TGCGGGATTT TACGCAGAGT GAAGCCAGAT
ATACCACCCA ATCAGGCAAC CCACATCCTG CGGCATACAT TCGCAAGCCA TTTCATGATG
AATGGGGGCA ATATAATCGC ACTGCAACAG ATTCTGGGAC ATGCGAGCAT TCAGCAGACG
ATGGCCTATG CGCACCTTGC GCCTGACTAC CTGCAAAATG CCGTCGCGCT GAATCCTCTA
AAAGGCGGAG TGACGTTATA A
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| Protein sequence | MSIKKLDDGR YEVDIRPRGR DGKRIRRKFE RKAEAVAFER YTIAYASQKE WAGQRADRRT
LSELLNIWWK YHGQNHEHGT KEFNHLLKTI SGIGDIPVSR MSKRALMDYR SMRLRDGISA
ATINRDMYRL SGMFTKLIQL DEFSGQHPIH GLPPLAEANP EMTFLEKAEI EKLLNVLDGD
DLLVALLCLS TGGRWTEVAT LKPAQITNCR VTFLKTKNGK KRTVPISEEL EKKVKEEASA
KLFKVDYEKF CGILRRVKPD IPPNQATHIL RHTFASHFMM NGGNIIALQQ ILGHASIQQT
MAYAHLAPDY LQNAVALNPL KGGVTL
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