| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4003 |
|---|
| Symbol | |
|---|
| ID | 6146293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 4082773 |
|---|
| End bp | 4085493 |
|---|
| Gene Length | 2721 bp |
|---|
| Protein Length | 906 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641618828 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001745966 |
|---|
| Protein GI | 170679594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC TAAACAAACA TATAGCTAGT ATTTTAAGAG CAAAAGATGA GGAGTCTTTA
GCTATTTTTG TAGGGGCTGG TGTTTCAAAA TCCTCTGAAA CAAAAACTAT CAAAATGCCT
TCATGGGGGG ACTTAATTGA CACTCTCATT TCAGATCTCA ATATCAAAGA TGAATCAGAT
TATTTAAAAA TAGCACAGCT TTATTACCTC ACATTTGGTG AGCATCTTTA CTACAAAAGA
ATCAAAGATT TCTTTCCTGA AAATGTTCCC CATTCAAAGA TTCACGATCT AATATTTAAA
CTGAATCCTC ACTCTGTTAT CACAACGAAT TGGGACACTT TGCTTGAAGC AGCTATAAAT
GCCAAATCTT ACTTTTATAA TATAATAAGC AGTGACAAAG ATTTGATGAA ATCTTACCTT
GGCAAAAAAT TGATAAAAAT GCATGGTGAT TTTAAAAATC ACAACATCGT CTTTAAAGAA
GATGATTACT TAAATTATAG CTTCAATTTT CCCTTAATTG AAAATTATGT TAAAAGTGTT
ATTTCCACCC ATACTGTGCT ATTTTTGGGG TATTCATATA ATGATATAGA TCTAAAGCAA
ATAATTAAAT GGACTCAGAA TCATTCATCT GTTAGACCCC CTATGTATTT AGTAGTATTC
GAAGATATTC CTGCTCAAAG AAAATATCTT GAAAGTCATG GTATAACCAC TATTATTTTA
ACCGATGAAA CAATCAAACC TTTCAATAAC AATTCATATT CAAACAAGTT ATATACTTTC
CTGCATAGCC TAAATAGCCT AGAACTATGT GCAGACTTAG ATGATATCGA AATAATTAAT
GCTATTTATT CAAGAGTGAG ATCTCTTCAA TCGTTAAATG CAATACTTGC TGAACAAGTT
ACCAGATGTT TCACTAATTG CGGTTTAATG TATATTGATG ACAATGGACC AAAAGCTTTA
TTGCAATTTT ATGACACCGA AGTAACCTCT AATGATAATA ATATAGAGCT AAGAGGATTT
TATAAGAAGT TTTTGAGTAT ACTCAGTAAT GATAAAAAAG TTAAAGACTA TAAGCCGCAT
CTCCAAAAAT TATTTTTTAT ATTAAAAAAA GCAAGTATAT ATGGTATTGT TTTAAACGAT
AAACATGATG AAGTGCTACT GATTACTGAA GTGCTACCAA ATGATTCATT AATTAAAATA
GATAAGGAAA TTAATTTCAA CTATAACGAA ATAGTTACCT ATACACGCCC CCATAAGGTT
GCAAATAGTA TAGACAAGAC TAAGAAATAT AATTGCTTCC AGTTAAATAA ATACGATGAG
GCTTACAGTA TTATAGAGGA GGAATTATCA GAAGAGATCA GACAAAAGGA CTATGCAAAT
ATTCTCATAT CGCTTTTCAA TCAAAATATT ATTTTGAATA GATTGAAGTA TGATTTTTCA
ATTAATAGAG AAAGATACTC AACTCTTGAG GAGAATAAAA TTCATGAATT ATATGATAAC
TTACCGAGAA ATATAAAAAA AACCGTCTCC GTAATCTATG ATTTAGTAAC CTTTAATTAT
TTATTAAATC TTCACTACAC CGTTAGCTCA TTATTAACAA AGTATAGCGA TATAAGAAAA
AGAAATACAA AGTTATTAGT TGACGGGGAT CTTCATAAAA CGGAATTTCT TTTCGAAAAC
CTTATAATTT TTGTTGTAAA AAATGGATGT TTAATTGATG TTTATAAAGA ATTCAAGGAT
GTGATTCGCA AATTCATTGA AATAAAAATA ATCAAGGATT CTGATAAAGA CGAGATTTCT
CTAACAAGAT TAGAATTATA TTCATGCATT AAATACATTG ATAATAAAAC CCTATCTCTT
ATACTAAGGA AAGAAGATAA AAAACTATTA TCGCTGTCTG TTCAACCCAA AGAATTAGAT
TGGTTAATAA ATACTGTACT GCAAAACCTA GCGAAGTCAT ATAGCAAGTT CGCTACGTTT
CTCAACCCTA TAGAAGGAAA GTTAATCAAC GCATTAAAAC TACTATCTTT AATGAAAATA
ACCACAGAGC AAGACGCGGT AGTATTAAAA ACATTAAACG ACACTTTAAA GTCCTCATAC
CACAACCTAG CATTCTATGA TGCTATTTCC GAATATGTCG TTATAAGGTA CAACACCCAC
AGTGAAACTT TATCCACTGA CAGCATAAAA ACTTTAATAT ACACGATTCT CGATAAGTTA
ATAAGTAGAA ACCTTGGTAG GTATGAGGTG ATAGCTATAG TCAATAGAGG CCTTGCTAAT
ATTTTTTCAG TAGCCAAAAA ACTGGGCGTT AATATAGAAG ACGACAGCAA GGTCGATAAA
TTACTTCATG AAATTAGTTC TTATCCGAAT ACAGATAAAG CAAGAGCTGC TGAAACAATA
CTATATGATC TGTACAGAAT ATCAACAGAA AAGAATAGAG ATAAAATAAA ATCATTTATC
AAAAATATTT CCACAACTGA TTTCAATGAA GAAAGAAAGA TTAAATTTGA ATTATTTTTA
TTAGCATCAG AGATTTCAGA CAGCTATGAC AATCTTCCTG AGAAAGTATC CAAGCTTGTT
GAAAACTATA AAGGATTTAG ATTTAACTCA GAAGCAGAGA CAATCAGAGG TTTATTACGC
TATATAGTCA ACACACGGAA ATTAAGTGAT TTCTCACAAG CACTTTTGAA GATTGAAGAG
ATAATAAATA ATTACAAATA A
|
|---|
| Protein sequence | MDLLNKHIAS ILRAKDEESL AIFVGAGVSK SSETKTIKMP SWGDLIDTLI SDLNIKDESD
YLKIAQLYYL TFGEHLYYKR IKDFFPENVP HSKIHDLIFK LNPHSVITTN WDTLLEAAIN
AKSYFYNIIS SDKDLMKSYL GKKLIKMHGD FKNHNIVFKE DDYLNYSFNF PLIENYVKSV
ISTHTVLFLG YSYNDIDLKQ IIKWTQNHSS VRPPMYLVVF EDIPAQRKYL ESHGITTIIL
TDETIKPFNN NSYSNKLYTF LHSLNSLELC ADLDDIEIIN AIYSRVRSLQ SLNAILAEQV
TRCFTNCGLM YIDDNGPKAL LQFYDTEVTS NDNNIELRGF YKKFLSILSN DKKVKDYKPH
LQKLFFILKK ASIYGIVLND KHDEVLLITE VLPNDSLIKI DKEINFNYNE IVTYTRPHKV
ANSIDKTKKY NCFQLNKYDE AYSIIEEELS EEIRQKDYAN ILISLFNQNI ILNRLKYDFS
INRERYSTLE ENKIHELYDN LPRNIKKTVS VIYDLVTFNY LLNLHYTVSS LLTKYSDIRK
RNTKLLVDGD LHKTEFLFEN LIIFVVKNGC LIDVYKEFKD VIRKFIEIKI IKDSDKDEIS
LTRLELYSCI KYIDNKTLSL ILRKEDKKLL SLSVQPKELD WLINTVLQNL AKSYSKFATF
LNPIEGKLIN ALKLLSLMKI TTEQDAVVLK TLNDTLKSSY HNLAFYDAIS EYVVIRYNTH
SETLSTDSIK TLIYTILDKL ISRNLGRYEV IAIVNRGLAN IFSVAKKLGV NIEDDSKVDK
LLHEISSYPN TDKARAAETI LYDLYRISTE KNRDKIKSFI KNISTTDFNE ERKIKFELFL
LASEISDSYD NLPEKVSKLV ENYKGFRFNS EAETIRGLLR YIVNTRKLSD FSQALLKIEE
IINNYK
|
|---|
| |