Gene EcSMS35_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3365 
Symbol 
ID6146889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand+ 
Start bp3442896 
End bp3443519 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content53% 
IMG OID641618194 
ProductPadR family transcriptional regulator 
Protein accessionYP_001745343 
Protein GI170680145 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.230818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATC ATCACGAAGG GTGTTGTAAA CATGAAGGCC AGCCACGCCA TGAGGGCTGC 
TGCAAAGGTG AGAAGTCAGA ACACGAGCAC TGCGGACACG GTCACCAGCA TGAACACGGT 
CAATGCTGCG GTGGTCGCCA CGGTCGCGGC GGCGGTCGTC GGCAACGTTT CTTTGGTCAC 
GGTGAATTAC GTCTGGTGAT TCTGGATATT CTCTCGCGCG ATGACAGCCA CGGTTACGAA 
TTGATTAAAG CGATTGAGAA TCTAACCCAG GGGAATTACA CCCCAAGCCC GGGCGTCATC 
TACCCAACGC TGGATTTTCT GCAGGAGCAG TCGCTGATTA CCATTCGCGA AGAGGAAGGT 
GGTAAGAAGC AGATTGCGCT GACCGAACAA GGCGCGCAGT GGCTGGAAGA AAACCGCGAA 
CAGGTAGAGA TGATTGAAGA ACGCATCAAA TCGCGTTGCG TTGGCGCTGC GCTGCGCCAG 
AACCCGCAAA TGAAGCGGGC GCTGGATAAT TTTAAAGCGG TGCTGGATTT ACGCGTCAAC 
CAGAGCGATA TCACTGATGC ACAAATAAAA AAGATCATTG CGGTGATCGA CCGCGCCGCT 
TTTGATATTA CGCAACTGGA TTAA
 
Protein sequence
MSHHHEGCCK HEGQPRHEGC CKGEKSEHEH CGHGHQHEHG QCCGGRHGRG GGRRQRFFGH 
GELRLVILDI LSRDDSHGYE LIKAIENLTQ GNYTPSPGVI YPTLDFLQEQ SLITIREEEG 
GKKQIALTEQ GAQWLEENRE QVEMIEERIK SRCVGAALRQ NPQMKRALDN FKAVLDLRVN 
QSDITDAQIK KIIAVIDRAA FDITQLD