| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3242 |
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| Symbol | gspI |
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| ID | 6144131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3313994 |
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| End bp | 3314365 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618072 |
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| Product | general secretion pathway protein GspI |
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| Protein accession | YP_001745222 |
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| Protein GI | 170679735 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.754588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCGTG GATTTACCTT GCTGGAAGTA ATACTCGCGC TGGCGATTTT TGCGCTGGCT
GCCACGGCGG TGTTACAGAT TGCCAGCGGT GCGCTGAGTA ATCAGCAAAT CCTTGAGGAG
AAAACGGTAG CGGGCTGGGT AGCTGAAAAC CAGACTGCGC TGCTTTACCT GATGACCCGT
GAACAACGAG CGGTCAGGCA CCAGGGCGAG AGTGATATGG CAGGAAGCCG CTGGTACTGG
CGAACGATCC CTCTGAATAC CGGTAACGTG CTGCTCCAGG CGGTGGATAT TGAAGTCAGT
CTTCATGACG ACTTTTCGCC AGTGATTCAG TCAAGACGCG CCTGGTTTAG CGCCGTGGGA
GGCCAACAGT GA
|
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| Protein sequence | MKRGFTLLEV ILALAIFALA ATAVLQIASG ALSNQQILEE KTVAGWVAEN QTALLYLMTR
EQRAVRHQGE SDMAGSRWYW RTIPLNTGNV LLQAVDIEVS LHDDFSPVIQ SRRAWFSAVG
GQQ
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