| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2778 |
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| Symbol | |
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| ID | 6143706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2860012 |
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| End bp | 2862264 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641617647 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_001744807 |
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| Protein GI | 170681220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.859165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.73378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCTA TAAAACCAGG ACCAAGAAAT TTACCTATCG ACAACCCCAC ATTGTTATCA
TGGAACATTA CTGACGGGGA TCTAAATTCC AAATTAAATA CATTAGAATA TCTAAACTGT
ATAACAAATA TTATTAATGC TTGTGGAGTT TATCCTCAGG ATTTAAAAGA CAGAGAAATT
ATATCAACTT TTCACGCAGA AAAAGTCATT AATGATCTGT TAAAAAACGA TTATAAAATT
TCCCTTTCTC CAGATACAAC TTACCGAGAG CTGAATAAAG CTGCACAGCG TAGCATTACA
GCGCCAGACA GGATAGGAGA AGGGAAAACA TGGGTTTATC AACGAGATAC AATGGTTGAA
AGAGGTGATA ACAGCAGCGT TCATCAGTAT GGTCCAGCTG AACATTTCAC TCACATTATA
TCTGACAAAC CATCCCCAAA AGATAAGTAT GTTGCATATG CTATTAACAT TCCTGACTAT
GAGCTGGCAG CCGATGTATA TAATATTAAC GTGACGTCAC CTTCCGGACA GCAAGAAACA
TTTAAAATAC TAATCAATCC AGAACATCTA CGGCAAACAC TTGAGCGTAA ATCTCTTACT
GCTGTTCAGA AATCACAATG TGAAATCATC ACCCCCAAAA AACCTGGCGA AGCGATTCTT
CATGCTTTTA ATGCCACCTA CCAGCAAATC AGGGAAAATA TGTCTGAGTT TGCACGTTCC
CATTATGGGT ATATACAAAT TCCTCCAGTG ACAACTTTCC GCGCCGACGG ACCAGAAACT
CCCGAAGAAG AAAAAGGTTA CTGGTTTCAC GCTTATCAAC CCGAAGATCT TTGTACCATC
CATAATCCAA TGGGAGATTT GCAGGATTTT ATCGCATTGG TTAAAGATGC TAAAAAATTT
GGTATCGATA TCATTCCTGA TTATACCTTT AACTTTATGG GAATTGGGGG TAGTGGTAAA
AATGACCTGG ATTATCCCTC TGCTGATATA CGAGCGAAGA TCAGTAAAGA TATAGAAAGT
GGTATCCCTG GCTATTGGCA AGGTCAGGTT TTGATTCCAT TTACTATAGA TCCAGTAACA
AAAGAACGTA AACAAATCCA TCCAGAAGAT ATACATCTCA CTGCAAAAGA CTTTGAAACA
AGTAAAGATA ACATCTCTAA GGATGAATGG GAAAACCTCC ATGCATTAAA AGAAAAGCGT
TTAAATGGAA TGCCTAAAAC AACCCCCAAA AGTGACCAGG TTATTATGTT GCAAAATCAA
TACGTTCGTG AAATGCGAAA ATATGGCGTA CGAGGTTTAC GTTACGATGC AGCAAAACAC
TCAAAACATG AACAAATAGA AAGATCAATA ACTCCACCGC TTACAATTTA TAATGAGCGA
TTACACAATA CTAACTTATT TAAGCCAATA TATCATGAAA AAGCCGTTAT GAATTACATG
GAATACCTGG TAACTTGTCA GTTGGATGAA GAACAAATGT CATCGCTGCT TTATGAAAGA
GATGATTTAA GCGCCATTGA TTTTTCATTG CTCATGAAGA CGATAAAAGC CTTTTCATTT
GGTGGCGATC TCCAAACCCT TGCATCAAAA CCGGGTTCAA CAATCTCAAG CATCCCGTCA
AAAAGACGGA TATTGATTAA CATTAACCAC GATTTTCCTA ACAATGGCAA TCTTTTCAAT
GACTTTCTAT TTAACCATCA ACAAGATGAA CAATTAGCAA TGGCATATAT GGCCGCTCTC
CCGTTCAGCA GGCCTTTAGT TTACTGGGAT GGCCAAGTAT TAAAATCAAC GACTGAAATT
AAAAATTATG ATGGGTCGAC GCGTGTCGGC GGTGAGGCGT GGCTTAATAA AGGTTGCTCT
ACCTATCAGC AGCTCTACAA TGAATTCCAC GCATTATATA TAGATAAAGC AGGAATATGG
AGCGCATTTG AGGGTGTATT TGCAACTAAA AACGTTCTGG CCTTTAGTCG TGGGGATTCT
GTGAACATTA ATCACTCTCC TCATGATGGA CTAGTTATAA TAAATAAAGG AAACGAAGAA
GTTGAAGGTA CCTGGCCTAA CAAATTGCAA CCTGGAATAT ATAAAAACAT GGGGAGTAAT
AGCGTTAACA TTATTATTAA TAATACCCGA AAAATTATCC CCCCTGGTAA AGCATTTATG
CTTAGAGGCG GAACTCTAAA TATCAATATT CCTGGGCGTA GCGCTCTTCT TTTAGGGAAA
ACTGGAGAAC CGCCGAACTA TCTCTATTTG TAA
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| Protein sequence | MFSIKPGPRN LPIDNPTLLS WNITDGDLNS KLNTLEYLNC ITNIINACGV YPQDLKDREI
ISTFHAEKVI NDLLKNDYKI SLSPDTTYRE LNKAAQRSIT APDRIGEGKT WVYQRDTMVE
RGDNSSVHQY GPAEHFTHII SDKPSPKDKY VAYAINIPDY ELAADVYNIN VTSPSGQQET
FKILINPEHL RQTLERKSLT AVQKSQCEII TPKKPGEAIL HAFNATYQQI RENMSEFARS
HYGYIQIPPV TTFRADGPET PEEEKGYWFH AYQPEDLCTI HNPMGDLQDF IALVKDAKKF
GIDIIPDYTF NFMGIGGSGK NDLDYPSADI RAKISKDIES GIPGYWQGQV LIPFTIDPVT
KERKQIHPED IHLTAKDFET SKDNISKDEW ENLHALKEKR LNGMPKTTPK SDQVIMLQNQ
YVREMRKYGV RGLRYDAAKH SKHEQIERSI TPPLTIYNER LHNTNLFKPI YHEKAVMNYM
EYLVTCQLDE EQMSSLLYER DDLSAIDFSL LMKTIKAFSF GGDLQTLASK PGSTISSIPS
KRRILININH DFPNNGNLFN DFLFNHQQDE QLAMAYMAAL PFSRPLVYWD GQVLKSTTEI
KNYDGSTRVG GEAWLNKGCS TYQQLYNEFH ALYIDKAGIW SAFEGVFATK NVLAFSRGDS
VNINHSPHDG LVIINKGNEE VEGTWPNKLQ PGIYKNMGSN SVNIIINNTR KIIPPGKAFM
LRGGTLNINI PGRSALLLGK TGEPPNYLYL
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