| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2582 |
|---|
| Symbol | |
|---|
| ID | 6143089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 2636075 |
|---|
| End bp | 2636932 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641617453 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_001744618 |
|---|
| Protein GI | 170683537 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTACC TGACGAAAAT ACGCAATGCG GAAAGTGAAT TTACCGGGAA CGAGCAAAAA
ATTGCTGACT TTCTGCGGGC CAACGTGAGT GAGCTGAAAT CCGTCTCTTC GCGCAAGATG
GCGAAACAGC TCGGCATCAG CCAGTCGAGT ATTGTGAAGT TTGCCCAGAA GCTCGGCGCG
CAAGGATTTA CTGAATTGCG TATGGCGTTA ATTGGCGAAT ACAGTGCCAG CCGGGAGAAA
ACGAATGCCA CGGCGCTGCA CCTGCACAGT TCGATTACCA GTGATGATTC GCTGGAAGTG
ATTGCCCGTA AACTGAATCG CGAAAAAGAG CAGGCGCTGG AGCAAACCTG CGCGTTGTTT
GACTACGCGC GGCTGCAAAA AATCATTGAG GTCATCAGTA AAGCACCGTT TATCCAGATA
ACGGGCCTGG GCGGGTCGGC GCTGGTGGGG CGCGATCTGT CGTTCAAACT GATGAAAATT
GGTTATCGCG TGGCCTGTGA GGCCGACACC CACGTACAAG CCACCGTTTC TCAGGCGCTA
AAAAAAGGCG ATGTACAAAT CGCTATCTCT TACAGTGGCA GTAAAAAAGA GATTGTCTTG
TGCGCCGAGG CAGCGCGAAA GCAGGGGGCG ACGGTGATTG CCATTACCTC ATTAACCGAT
TCCCCGCTGC GGCGGCTGGC GCATTACACC CTCGATACCG TTTCTGGCGA AACCGAATGG
CGCAGCTCGT CGATGTCCAC CCGCACGGCG CAAAATTCTG TTACCGATTT ACTGTTTGTT
GGCCTTGTGC AACTCAATGA TGTGGAGTCA TTGAAAATGA TTGAGCGCAG CAGTGAGCTA
ACGCAACGCC TGAAATGA
|
|---|
| Protein sequence | MLYLTKIRNA ESEFTGNEQK IADFLRANVS ELKSVSSRKM AKQLGISQSS IVKFAQKLGA
QGFTELRMAL IGEYSASREK TNATALHLHS SITSDDSLEV IARKLNREKE QALEQTCALF
DYARLQKIIE VISKAPFIQI TGLGGSALVG RDLSFKLMKI GYRVACEADT HVQATVSQAL
KKGDVQIAIS YSGSKKEIVL CAEAARKQGA TVIAITSLTD SPLRRLAHYT LDTVSGETEW
RSSSMSTRTA QNSVTDLLFV GLVQLNDVES LKMIERSSEL TQRLK
|
|---|
| |