| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2516 |
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| Symbol | dsdA |
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| ID | 6145252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2570037 |
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| End bp | 2571353 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641617388 |
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| Product | D-serine dehydratase |
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| Protein accession | YP_001744559 |
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| Protein GI | 170681826 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3048] D-serine dehydratase |
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| TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.232923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCGC TCATCGCCCA GTATCCGTTG GTAGAGGATC TGGTTGCTCT TCAAGAAACC
ACCTGGTTTA ATCCTGGCAC GACCTCATTG GCTGAAGGTT TACCTTATGT TGGCCTGACC
GAACAGGATG TTCAGGACGC CCATGCGCGC TTATCCCGTT TTGCACCCTA TCTGGCAAAA
GCATTTCCTG AAACTGCTGC TACTGGGGGG ATTATTGAAT CAGAACTGGT TGCCATTCCG
GCTATGCAAA AACGGCTGGA AAAGGAATAT CAACAACCGA TCAGCGGGCA ACTGCTACTG
AAAAAAGATA GCCATTTGCC CATTTCCGGC TCCATAAAAG CACGCGGCGG GATTTATGAA
GTCCTGGCAC ATGCAGAAAA ACTGGCTCTG GAAGCGGGGT TGCTGACGCT TGAAGATGAC
TACAGCAAAC TGCTTTCCCC GGAGTTTAAA CAGTTCTTTA GTCAATACAG CATTGCTGTG
GGCTCAACCG GAAATCTGGG GTTATCAATC GGCATAATGA GCGCCCGCAT TGGCTTTAAG
GTGACAGTGC ATATGTCTGC TGATGCCCGG ACGTGGAAAA AAGCGAAACT GCGCAGCCAT
GGCGTTACAG TCGTGGAATA TGAGCAAGAT TATGGTGTTG CTGTCGAGGA AGGACGTAAA
GCAGCGCAGT CTGACCCGAA CTGTTTCTTT ATTGATGACG AGAATTCCCG CACGTTGTTC
CTTGGGTATT CCGTCGCTGG CCAGCGTCTT AAAGCGCAAT TTGCCCAGCA AGGTCGTATC
GTCGATGCTG ATAACCCTCT GTTTGTCTAT CTGCCGTGTG GTGTTGGTGG TGGTCCTGGT
GGCGTCGCAT TCGGACTTAA ACTGGCGTTT GGCGATCATG TTCACTGCTT TTTTGCCGAA
CCAACGCACT CCCCTTGTAT GTTGTTAGGC GTCCATACAG GATTACACGA TCAGATTTCT
GTTCAGGATA TTGGTATCGA CAACCTTACC GCAGCGGATG GCCTTGCAGT TGGTCGCGCA
TCAGGCTTTG TCGGGCGGGC GATGGAGCGT CTGCTGGATG GCTTCTATAC CCTTAGCGAT
CAAACCATGT ATGACATGCT TGGCTGGCTG GCGCAGGAAG AAGGTATTCG TCTTGAACCT
TCGGCACTGG CGGGTATGGC TGGGCCTCAG CGCGTGTGCG CATCAGTAAG TTACCAACAG
ATGCACGGTT TCAGCGCAGA ACAACTGCAT AATGCCACTC ATCTGGTGTG GGCGACGGGA
GGTGGAATGG TGCCGGAAGA AGAGATGGAG CAATATCTGG CAAAAGGCCG TTCATAA
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| Protein sequence | MNSLIAQYPL VEDLVALQET TWFNPGTTSL AEGLPYVGLT EQDVQDAHAR LSRFAPYLAK
AFPETAATGG IIESELVAIP AMQKRLEKEY QQPISGQLLL KKDSHLPISG SIKARGGIYE
VLAHAEKLAL EAGLLTLEDD YSKLLSPEFK QFFSQYSIAV GSTGNLGLSI GIMSARIGFK
VTVHMSADAR TWKKAKLRSH GVTVVEYEQD YGVAVEEGRK AAQSDPNCFF IDDENSRTLF
LGYSVAGQRL KAQFAQQGRI VDADNPLFVY LPCGVGGGPG GVAFGLKLAF GDHVHCFFAE
PTHSPCMLLG VHTGLHDQIS VQDIGIDNLT AADGLAVGRA SGFVGRAMER LLDGFYTLSD
QTMYDMLGWL AQEEGIRLEP SALAGMAGPQ RVCASVSYQQ MHGFSAEQLH NATHLVWATG
GGMVPEEEME QYLAKGRS
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