| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2513 |
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| Symbol | |
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| ID | 6143355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2566538 |
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| End bp | 2567107 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641617385 |
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| Product | type 1 fimbriae regulatory protein |
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| Protein accession | YP_001744556 |
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| Protein GI | 170684288 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAT TTATTACTCA TAGTGAATGG TTGTTATTTT TTGAAGCCAT CAACGGTTCA
AAAAATGAAA TTAGAGATAA AGCCATGTTA CAAATGGCAT ATGTACATGG TCTTAGGGTA
AGCGAGCTTA TTGCACTAAA GATTAGCGAC ATTGACTTTT CAGAGTCAGC AATATATATC
AAGCGTTTAA AAAATGGATT ATCCACAGTA CATCCCCTGC AAAAAGAAAC TGTTCTGTTA
TTAAAAAAAT GGCTAGCACT ACGTGATAAC ATAGTAAAAA AACCTTTTGA AGACTCTTTA
TTTCTTTCTT GTCAAGGAAA TAAAATCTCG AGACAATATG TGTATAAGAT GTGTAAGAAA
TATAGTCACA ATATGAATAT TAATATTCAT CCTCACATGC TTAGGCATGG TTGTGGGTAT
GCTTTAGCTA ATCAAGGGTT AGACACCAGA CTAATACAAG ATTATTTAGG GCACAGAAAT
ATACATCATA CGGTATTATA TACAGCCAGT AATGCAGCAA GATTTAAACG AGTATGGGAG
GGTGATGTGT TAGATATAAA GAAGATATAA
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| Protein sequence | MRKFITHSEW LLFFEAINGS KNEIRDKAML QMAYVHGLRV SELIALKISD IDFSESAIYI
KRLKNGLSTV HPLQKETVLL LKKWLALRDN IVKKPFEDSL FLSCQGNKIS RQYVYKMCKK
YSHNMNINIH PHMLRHGCGY ALANQGLDTR LIQDYLGHRN IHHTVLYTAS NAARFKRVWE
GDVLDIKKI
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