Gene EcSMS35_2412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_2412 
Symbol 
ID6146006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp2461936 
End bp2462271 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content53% 
IMG OID641617285 
ProductSMR family multidrug efflux pump 
Protein accessionYP_001744457 
Protein GI170680869 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGGC TAACATTAGT CTTTGCCAGC TTGCTTAGCG TTGCCGGGCA GTTGTGTCAG 
AAACAAGCAA CCTGCTTTGT GGCGATAAAC AAACGGCGCA AACATATCGT GCTGTGGCTG
GGACTGGCGC TGGCTTGTCT TGGTCTTGCC ATGGTGCTCT GGCTGCTGGT CTTGCAGAAC
GTACCGGTAG GCATTGCCTA CCCGATGTTA AGTCTGAATT TTGTCTGGGT GACGCTGGCT
GCAGTAAAAC TGTGGCACGA ACCGGTATCG CCGCGTCACT GGTGTGGGGT GGCGTTCATT
ATTGGTGGCA TTGTGATCCT CGGGAGTACC GTGTAA
 
Protein sequence
MIWLTLVFAS LLSVAGQLCQ KQATCFVAIN KRRKHIVLWL GLALACLGLA MVLWLLVLQN 
VPVGIAYPML SLNFVWVTLA AVKLWHEPVS PRHWCGVAFI IGGIVILGST V