| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2178 |
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| Symbol | |
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| ID | 6147382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2184571 |
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| End bp | 2185641 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641617054 |
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| Product | putative fimbrial protein |
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| Protein accession | YP_001744228 |
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| Protein GI | 170683719 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0306197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.828503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAA TTTCAGGGGA TAGTAGTGTG TTAAGACTCC GGCTTCTTTT GACTGCTGTT
TTAATGCTGT GGGGATTTCA TGCCGCCGCT TATACCGGGC AGTGTCATAC CACTCAGGGG
AATCCGTATA TTGGCGTCAA TTTTGGCGTT AAAACCCTGG AGGAGGAAGA GAATACGGCT
GGAAAAGTCA AAGATGAATT TTATCAGTGG AGTGAATCGA ATGATTATTA TGTTTCCTGC
GATTGCGATA AAGACAATGT CAGAAGTGGT CTATGGGCAT TCGCTGCGGA TTCTCCGTTA
GTTTATTTGG GCGACAACTG GTACAAAATT AACGATTATC TTGCCGCAAA GGTGCTATTA
GGAGTGAAAG GTAACACACC TTCGGCCGTA CCTTTTGAAA ATCTCGGTAC AGGAAGTGAT
ACCCGATGGC ATATTTGCGA TCCCGGTGGT CAACGTTTGG GCGGCAAGGG GGCAAGCGGC
AATAGCGGAA GTTTTTCACT GAAAATATTG CAGCCGTTTG TCGGTTCGGT CGTCATTCCT
CCTATGGCGC TGGCGCGACT ATATGAGTGT TACAACATAC CCGCAAGTGA TTCCTGCACG
ACTACAGGTA CACCGGTTTT AGTGTATTAC CTGTCTGGTA CGATTAATTC ACTTGGCTCA
TGTTCTGTCA ATTCTGGAGA GACAATAGAG GTTGATTTGG GGGATGTATT TGCTGCCAAT
TTCCGTGTTG TAGGGCATAA ACCGCTTGGA TCCAGAACGG CAGAACTCTC AATTCCAGTC
AGGTGTAATA CCGGAAACGC AGAGCTGGTT AATGTTAATT TGAGTCTGAC GGCAACCAGT
GATCCCGATT ATCCTCAGGC AATCAAGACA TCACGACCAG GTGTCGGTGT TGTGGTCACC
GACAGCCAAA ACAACATTAT TTCGCCTGCC GGTGGCACAC TGCCGCTATC CATCCCTGAC
GACGCGGACA GCTTCGCTCG AATGAATGTT TATCCGGTCA GCACGACAGG TGTACCACCG
GAAACCGGGA GCTTTGAAGC CACAGCAACG GTGAGAATAA ACTTTGACTG A
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| Protein sequence | MRIISGDSSV LRLRLLLTAV LMLWGFHAAA YTGQCHTTQG NPYIGVNFGV KTLEEEENTA
GKVKDEFYQW SESNDYYVSC DCDKDNVRSG LWAFAADSPL VYLGDNWYKI NDYLAAKVLL
GVKGNTPSAV PFENLGTGSD TRWHICDPGG QRLGGKGASG NSGSFSLKIL QPFVGSVVIP
PMALARLYEC YNIPASDSCT TTGTPVLVYY LSGTINSLGS CSVNSGETIE VDLGDVFAAN
FRVVGHKPLG SRTAELSIPV RCNTGNAELV NVNLSLTATS DPDYPQAIKT SRPGVGVVVT
DSQNNIISPA GGTLPLSIPD DADSFARMNV YPVSTTGVPP ETGSFEATAT VRINFD
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