| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2028 |
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| Symbol | holB |
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| ID | 6145190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2049761 |
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| End bp | 2050765 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616904 |
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| Product | DNA polymerase III subunit delta' |
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| Protein accession | YP_001744080 |
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| Protein GI | 170681498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000033373 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000172568 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGATGGT ATCCATGGTT ACGACCTGAT TTCGAAAAAC TGGTAGCCAG CTATCAGGCC
GGAAGAGGTC ACCATGCGCT ACTCATTCAG GCGTTACCGG GTATGGGCGA GGATGCTTTA
ATCTACGCCC TGAGCCGTTA TTTACTCTGC CAACAACCGC AGGGCCACAA AAGTTGCGGT
CACTGTCGTG GATGTCAGTT GATGCAGGCT GGTACGCATC CCGATTATTA CACCCTGGCT
CCCGAGAAAG GGAAAAATGC GCTGGGCATT GATGCGGTAC GTGAAGTCAC CGAAAAGTTA
AATGAGCACG CACGTTTAGG TGGTGCGAAA GTTGTCTGGG TAACCGATGC TGCCTTACTG
ACCGACGCCG CGGCTAACGC ATTGCTGAAA ACGCTTGAAG AGCCACCAGC AGAAACCTGG
TTTTTCCTGG CTACCCGCGA GCCTGAACGT TTACTGGCAA CATTACGTAG TCGTTGTCGG
TTACATTACC TTGCGCCGCC GCCGGAACAG TACGCCGTGA CCTGGCTTTC ACGCGAAGTG
ACAATGTCAC AGGATGCATT ACTTGCCGCA TTGCGCTTAA GCGCCGGTTC GCCTGGCGCG
GCACTGGCGT TGTTTCAGGG AGATAACTGG CAGGCTCGTG AAACATTGTG TCAGGCGTTG
GCATATAGCG TGCCATCGGG CGACTGGTAT TCGCTGCTGG CGGCCCTTAA TCATGAACAA
GCTCCGGCGC GTTTACACTG GCTGGCAACG TTGCTGATGG ATGCGCTAAA ACGCCATCAT
GGCGCTGCGC AGGTGACCAA TGTTGATGTG CCGGGCCTGG TCGTCGAACT GGCAAACCAT
CTATCTCCCT CGCGCCTGCA GGCTATACTG GGGGATGTTT GCCACATTCG TGAACAGTTA
ATGTCTGTCA CAGGCATCAA CCGCGAGCTT CTCATCACCG ATCTTTTACT GCGTATTGAG
CATTACCTGC AACCGGGCGT TGTGCTACCG GTTCCTCATC TTTAA
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| Protein sequence | MRWYPWLRPD FEKLVASYQA GRGHHALLIQ ALPGMGEDAL IYALSRYLLC QQPQGHKSCG
HCRGCQLMQA GTHPDYYTLA PEKGKNALGI DAVREVTEKL NEHARLGGAK VVWVTDAALL
TDAAANALLK TLEEPPAETW FFLATREPER LLATLRSRCR LHYLAPPPEQ YAVTWLSREV
TMSQDALLAA LRLSAGSPGA ALALFQGDNW QARETLCQAL AYSVPSGDWY SLLAALNHEQ
APARLHWLAT LLMDALKRHH GAAQVTNVDV PGLVVELANH LSPSRLQAIL GDVCHIREQL
MSVTGINREL LITDLLLRIE HYLQPGVVLP VPHL
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