| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1983 |
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| Symbol | |
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| ID | 6143381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 2002860 |
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| End bp | 2004320 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641616859 |
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| Product | cyclic diguanylate phosphodiesterase domain-containing protein |
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| Protein accession | YP_001744035 |
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| Protein GI | 170683384 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.123377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACATCC AGCTCTGGTA TTCCGCAAAA GCAGAGTACC TGGCAGGAGC GAGATATGCC
GCCAACAATA TCAATCATAT ACTTGAAGAA GCGTCACAGG CGACTCAAAC AGCGGTTAAC
ATTGCCGGGA AGGAATGCGA CCTCGAGGAG CAATATCAGC TTGGCACTGA AGCAGCTCTG
AAACCTCACC TGCGCACAAT CATCATTCTC AAACAGGGAA CGGTCTGGTG TACATCCTTA
CCGGGGAATC GGGTCCTGCT GTCTCGTATT CCTGTTTTCC CGGACAGTAA TTTACTGTTG
GCTCCGGCAA TCGACACCGT TAATAGATTA CCTATCCTGC TCTATCAGAG CCAATTTGCA
GATACGCGCA TTTTGGTTAC GATAAGTGAT CAGCATATTC GCGGGGCGCT TAATGTACCC
TTGAAAGGGG TAAGGTATGT ATTACGCGTG GCGGATGACA TTATTGGACC TACGGGTGAT
GTGATGACGC TTAATGGACA TTATCCCTAT ACCGAGAAGG TTCACTCCAC AAAATATCAT
TTCACTATTA TCTTTAACCC GCCACCACTC TTTAGCTTCT ACAGACTTAT CGATAAAGGC
TTTGGGATAT TGATATTTAT TCTGTTAATC GCCTGCGCCG CTGCTTTGCT GCTTGATAGG
TATTTCAATA AAAGCGCAAC GCCTGAAGAG ATCCTGCGAC GGGCTATAAA TAATGGGGAG
ATCGTCCCTT TTTACCAACC TGTGGTAAAT GGTCGGGAAG GGACATTGCG GGGAGTTGAG
GTGTTAGCCC GCTGGAAACA ACCTCACGGT GGATATATAT CACCCGCGGC ATTTATTCCA
CTTGCTGAAA AATCCGGATT AATCGTTCCG CTTACGCAAA GCCTGATGAA TCAGGTTGCC
AGACAGATGA ACGCTATCTC GAGTAAACTG CCGGAGGGTT TTCATATTGG AATTAATTTT
AGCGCCTCGC ATATTATTTC GCCGACGTTT GTCGACGAGT GCTTAAATTA CCGTGACAGT
TTTACCCGCC GCGATTTAAA CCTCGTTCTG GAAGTCACCG AGCGTGAGCC ATTAAATGTT
GATGAAAGTC TGGTTCAGCG GTTGAACATT CTGCATGAAA ATGGTTTTGT CATCGCGCTG
GATGATTTCG GTACTGGCTA CTCAGGGCTT TCTTATCTGC ATGACCTGCA TATTGATTAT
ATCAAAATTG ATCACAGTTT CGTTGGCCGC GTCAACGCAG ACCCAGAATC AACCCGAATT
CTGGATTGTG TATTGGATCT GGCGCGTAAA CTTTCGATCA GTATCGTCGC TGAAGGTGTC
GAAACGAAAG AACAACTTGA TTATCTGAAC CAAAATAATA TCACATTTCA GCAGGGTTAT
TATTTCTATA AACCTGTTAC ATACATCGAC CTGGTCAAAA TTATCCTTTC TAAACCGAAG
GTGAAGGTTG TGGTTGAGTG A
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| Protein sequence | MNIQLWYSAK AEYLAGARYA ANNINHILEE ASQATQTAVN IAGKECDLEE QYQLGTEAAL
KPHLRTIIIL KQGTVWCTSL PGNRVLLSRI PVFPDSNLLL APAIDTVNRL PILLYQSQFA
DTRILVTISD QHIRGALNVP LKGVRYVLRV ADDIIGPTGD VMTLNGHYPY TEKVHSTKYH
FTIIFNPPPL FSFYRLIDKG FGILIFILLI ACAAALLLDR YFNKSATPEE ILRRAINNGE
IVPFYQPVVN GREGTLRGVE VLARWKQPHG GYISPAAFIP LAEKSGLIVP LTQSLMNQVA
RQMNAISSKL PEGFHIGINF SASHIISPTF VDECLNYRDS FTRRDLNLVL EVTEREPLNV
DESLVQRLNI LHENGFVIAL DDFGTGYSGL SYLHDLHIDY IKIDHSFVGR VNADPESTRI
LDCVLDLARK LSISIVAEGV ETKEQLDYLN QNNITFQQGY YFYKPVTYID LVKIILSKPK
VKVVVE
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