| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1813 |
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| Symbol | |
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| ID | 6142721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1833953 |
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| End bp | 1835632 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641616689 |
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| Product | alpha amylase family protein |
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| Protein accession | YP_001743867 |
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| Protein GI | 170679871 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.653374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA AAATTACGGA TTACCTGGAC GAAATCTACG GTGGAACATT TACCGCAACT
CATTTACAGA AACTTGTAAC GCGTCTTGAG AGTGCGAAAC GATTAATTAC ACTGCGACGT
AAAAAACACT GGGATGAAAG TGATGTCGTG TTAATCACCT ATGCCGATCA ATTTCACAGT
AATGATTTAA AACCACTACC CACATTTAAT CAGTTTTACC CTCAATGGCT GCAAAGCATT
TTTTCACATG TTCATTTATT ACCTTTTTAT CCATGGTCAT CTGATGATGG CTTTTCGGTA
ATTGATTATC AACAGGTCGC TAGTGAAGCG GGGGAGTGGC AGGATATTCA GCAACTCGGT
GAATGCAGTC ATTTAATGTT TGATTTTGTC TGCAACCATA TGTCGGCAAA AAGTGAATGG
TTTAAAAACT ATTTACAACA GCAGCCAGGT TTTGAAGATT TTTTTATTGC CGTTGACCCG
CAAACCGATC TCAGCGTCGT CACTCGCCCG CGTGCGTTAC CGTTATTAAC GCCATTCCAG
ATGCGCGATC ATTCAACGCG CCATTTATGG ACCACCTTTA GTGACGATCA AATTGACCTG
AATTACCGTA GCCCTGAAGT GTTACTGGCG ATGGTGGATG TATTGCTGTG CTACCTGGAA
AAGGGCGCAG AATATGTCCG TCTGGATGCC GTTGGCTTTA TGTGGAAAGA GCCGGGAACA
AGCTGCATCC ATCTGGAAAA AACACATCTG ATTATCAAAC TGTTACGGTC GATTATTGAT
GACGTAGCAC CAGGTACAGT GATCATTACC GAGACCAATG TTCCGCACAG AGACAACATT
GCTTACTTTG GCAACGGTGA TGACGAAGCG CATATGGTGT ACCAGTTCTC GCTGCCGCCG
CTGGTGCTGC ATGCGGTGCA AAAACAGAAC GTTGAGGCGC TTTGTGCGTG GGCGCAAAAC
CTGACACTAC CTTCCAGCAA CACCACCTGG TTTAACTTCC TCGCCTCTCA CGATGGCATC
GGGCTTAACC CACTGCGTGG CTTGCTACCC GAAAGCGAAA TATTAGCGCT GGTCGAGGCA
TTACAGCAGG AAGGGGCATT AGTTAACTGG AAAAATAATC CCGACGGTAC GCGTAGCCCG
TATGAAATGA ATGTCACTTA TATGGATGCG TTAAACCGCC GCGAGAGTAG CGATGAAGAA
CGTTGCGCCA GGTTTATCCT TGCCCATGCG ATTTTGTTAA GTTTCCCCGG TGTGCCAGCG
ATATATATTC AAAGTATTCT GGGCTCGCGT AATGATTACG CAGGTGTCGA AAAACTGGGA
TATAACCGTG CGATTAACCG TAAAAAATAT TACAGTAAAG AGATCACGAC CGAACTGAAC
AATAAAACGA CGTTAAGGCA CGCGGTATAT CATGAATTGT CGCGACTAAT TAAAATTCGT
CGAAGTCATA ACGAGTTTCA TCCAGATAAT GATTTTACCA TCGACACGGT TAATTCATCC
GTAATGTGTA TTCAAAGAAG CAACGCGGAT GGTAATTGTC TGACAGGATT GTTTAATGTC
AGTGAAAATA TTCAGCATAT AAATATTACT GACCTGCACG GTCGGGATCT GATTAGTGAA
GTTGATATAG TGGGTAATGA AATAACGCTG CGCCCCTGGC AGGTTATGTG GATTAAATAA
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| Protein sequence | MKQKITDYLD EIYGGTFTAT HLQKLVTRLE SAKRLITLRR KKHWDESDVV LITYADQFHS
NDLKPLPTFN QFYPQWLQSI FSHVHLLPFY PWSSDDGFSV IDYQQVASEA GEWQDIQQLG
ECSHLMFDFV CNHMSAKSEW FKNYLQQQPG FEDFFIAVDP QTDLSVVTRP RALPLLTPFQ
MRDHSTRHLW TTFSDDQIDL NYRSPEVLLA MVDVLLCYLE KGAEYVRLDA VGFMWKEPGT
SCIHLEKTHL IIKLLRSIID DVAPGTVIIT ETNVPHRDNI AYFGNGDDEA HMVYQFSLPP
LVLHAVQKQN VEALCAWAQN LTLPSSNTTW FNFLASHDGI GLNPLRGLLP ESEILALVEA
LQQEGALVNW KNNPDGTRSP YEMNVTYMDA LNRRESSDEE RCARFILAHA ILLSFPGVPA
IYIQSILGSR NDYAGVEKLG YNRAINRKKY YSKEITTELN NKTTLRHAVY HELSRLIKIR
RSHNEFHPDN DFTIDTVNSS VMCIQRSNAD GNCLTGLFNV SENIQHINIT DLHGRDLISE
VDIVGNEITL RPWQVMWIK
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