| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1729 |
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| Symbol | ydcW |
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| ID | 6146236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1734234 |
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| End bp | 1735658 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616606 |
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| Product | gamma-aminobutyraldehyde dehydrogenase |
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| Protein accession | YP_001743784 |
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| Protein GI | 170681515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000000210519 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAACATA AGTTACTGAT TAACGGAGAA CTGGTTAGCG GCGAAGGGGA AAAACAGCCT
GTCTATAATC CGGCAACGGG GGACGTTTTA CTGGAGATTG CCGAGGCATC CGCAGAACAG
GTGGATGCTG CTGTTCGCGC GGCAGATGCA GCATTTGCCG AATGGGGGCA AACCACGCCA
AAAGCGCGTG CGGAATGCCT GCTGAAACTG GCGGATGTTA TCGAAGAAAA TGGTCAGGTT
TTTGCCGAAC TGGAATCCCG TAATTGTGGC AAACCGCTGC ATAGTGCGTT CAATGATGAA
ATTCCGGCGA TTGTCGATGT TTTTCGCTTT TTCGCGGGTG CGGCGCGCTG TCTGAATGGT
CTGGCGGCAG GTGAATATCT TGAAGGTCAT ACTTCGATGA TCCGTCGCGA TCCGTTGGGG
GTTGTGGCTT CTATCGCACC GTGGAATTAT CCGCTGATGA TGGCAGCGTG GAAACTGGCT
CCGGCGCTGG CGGCAGGGAA CTGCGTAGTG CTTAAACCAT CAGAAATTAC CCCGCTGACC
GCGTTGAAGT TGGCTGAGCT GGCGAAAGAT ATCTTCCCGG CAGGCGTGAT TAACGTACTG
TTTGGCAGAG GCAAAACGGT GGGCGATCCG CTGACCGGAC ATCCCAAAGT GCGGATGGTG
TCGTTGACGG GCTCTATCGC CACCGGCGAG CACATCATCA GCCATACCGC GCCGTCCATT
AAGCGTACTC ATATGGAACT TGGTGGTAAA GCGCCAGTGA TTGTTTTTGA TGATGCGGAT
ATTGAAGCAG TGGTCGAAGG TGTACGTACT TTTGGCTATT ACAATGCTGG ACAGGATTGT
ACTGCGGCTT GTCGGATCTA CGCGCAAAAA GGCATTTACG ATACGCTGGT GGAAAAACTC
GGTGCTGCGG TGGCAACGTT AAAATCTGGT GCACCGGATG ACGACTCTAC GGAGCTTGGA
CCTTTAAGCT CGCTGGCGCA TCTCGAACGC GTCAGCAAGG CGGTAGAAGA GGCGAAAGCG
ACAGGGCACA TCAAAGTGAT CACTGGCGGT GAAAAGCGCA AGGGTAATGG CTATTACTAT
GCGCCGACGC TGCTGGCTGG CGCATTACAG GACGATGCCA TCGTGCAAAA AGAGGTATTT
GGTCCGGTAG TGAGTGTTAC GCTCTTCGAC AACGAAGAAC AGGTGGTGAA CTGGGCAAAT
GACAGCCAGT ACGGACTTGC ATCCTCGGTA TGGACGAAAG ATGTGGGCAG GGCGCATCGC
GTCAGCGCGC GGCTGCAATA TGGTTGTACC TGGGTCAATA CCCATTTCAT GCTGGTAAGT
GAAATGCCGC ACGGTGGGCA GAAACTTTCT GGTTACGGCA AGGATATGTC ACTTTATGGG
CTGGAGGATT ACACCGTCGT CCGCCACGTC ATGGTTAAAC ATTAA
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| Protein sequence | MQHKLLINGE LVSGEGEKQP VYNPATGDVL LEIAEASAEQ VDAAVRAADA AFAEWGQTTP
KARAECLLKL ADVIEENGQV FAELESRNCG KPLHSAFNDE IPAIVDVFRF FAGAARCLNG
LAAGEYLEGH TSMIRRDPLG VVASIAPWNY PLMMAAWKLA PALAAGNCVV LKPSEITPLT
ALKLAELAKD IFPAGVINVL FGRGKTVGDP LTGHPKVRMV SLTGSIATGE HIISHTAPSI
KRTHMELGGK APVIVFDDAD IEAVVEGVRT FGYYNAGQDC TAACRIYAQK GIYDTLVEKL
GAAVATLKSG APDDDSTELG PLSSLAHLER VSKAVEEAKA TGHIKVITGG EKRKGNGYYY
APTLLAGALQ DDAIVQKEVF GPVVSVTLFD NEEQVVNWAN DSQYGLASSV WTKDVGRAHR
VSARLQYGCT WVNTHFMLVS EMPHGGQKLS GYGKDMSLYG LEDYTVVRHV MVKH
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