| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1517 |
|---|
| Symbol | sufE |
|---|
| ID | 6144821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1503574 |
|---|
| End bp | 1503990 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616395 |
|---|
| Product | cysteine desufuration protein SufE |
|---|
| Protein accession | YP_001743575 |
|---|
| Protein GI | 170680508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2166] SufE protein probably involved in Fe-S center assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000018022 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.000000327732 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAT TGCCGGATAA AGAAAAATTG CTGCGTAATT TTTTACGCTG CGCCAACTGG
GAAGAGAAAT ATCTCTACAT TATTGAGCTG GGCCAGCGTC TGCCAGAATT ACGCGACGAA
GACCGAAGCC CACAAAATAG CATTCAGGGC TGCCAGAGTC AGGTGTGGAT TGTCATGCGC
CAGAATGCGC AGGGAATTAT TGAATTGCAG GGTGACAGCG ATGCGGCGAT TGTGAAAGGG
CTAATTGCGG TCGTCTTTAT TCTCTACGAT CAGATGACGC CGCAGGATAT TGTCAATTTC
GATGTGCGCC CGTGGTTTGA AAAAATGGCG CTCACCCAAC ATCTCACCCC CTCTCGTTCA
CAAGGTCTGG AAGCGATGAT TCGCGCAATT CGCGCCAAAG CCGCTGCACT TAGCTAA
|
|---|
| Protein sequence | MALLPDKEKL LRNFLRCANW EEKYLYIIEL GQRLPELRDE DRSPQNSIQG CQSQVWIVMR
QNAQGIIELQ GDSDAAIVKG LIAVVFILYD QMTPQDIVNF DVRPWFEKMA LTQHLTPSRS
QGLEAMIRAI RAKAAALS
|
|---|
| |