| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1471 |
|---|
| Symbol | |
|---|
| ID | 6146032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1453897 |
|---|
| End bp | 1455795 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641616349 |
|---|
| Product | ankyrin repeat-containing protein |
|---|
| Protein accession | YP_001743529 |
|---|
| Protein GI | 170683130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.103946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA ACGACATTAT TATCAGAACT CATTATAAGT CTCCTCATAG AATGCACATC
GATAGCGACA TACCAACGCC TTCATCAGAG CCTATTAATC AATTTGCGCG CCAACTCATC
ACCCTACTTG ATACCTCTGA CTTAAGTTCG ATGCTGACAT ACTGTGTTAC TCAGGAATTT
ACCGCAAACT GTCGAAAAAT ATCACAAAAT TGTTATTCCA CTGCCCTTTT TACCATTAAC
TTTGCCACTT CACCCATCCA TGCAGAAAAT ATACTCATTA CATTACACTA TAAAAAAGAA
ATCATTTCCT TATTACTGGA AACCACGCCT ATTAAAGCTA ACCATTTGCG AAGCATACTG
GATTATATTG AACAGGAACA GTTAACTGCC GAAAATCGTA ACCATTGTAT GAAACTGTCT
AAAAAAATCC ATAGAGAAAA AACTATACAA CCAACAGTAA ATCTCAATGG TAGTGCATTT
TTTTTGCAAT CTCCTTCTGA CGCTATTTTT TGTCGCCATC TGTCATTGCA ATACGCCCTT
GATTCACTGA GAAATGGAAA AGGCAAAGTC AATCTGATTA AACATTACTC CTCCGTTGAA
TCCATACAGC AGCATGTTCC CTTAGTCCGG GACGCGGAGT TCAGATCATT ACTTCGCCAT
CCTCCTGCAG GGAGTCGCGT TATCGCGAGT AAGGATTTTG GCTTCGCTTT AGATATTTTC
TTCTGTCGAA TGATGGCAAA CAATGTCAGT CATATGTCCG CGATTTTATA TATAGACAAT
CATACTTTGT CAGTAAGGCT ACGAATAAAG CAGTCAGCGT ATGGGCAATT AAATTATGTT
GTGTCCGTTT ACGACCCGAA CGATACCAAC GTTGCCGTCA GAGGCACCCA CAGGACAGCA
CGGGGCTTTC TCTCGCTCGA TAAATTCATC AGTTCAGGTC CCGATGCTCA GACCTGGGCT
GATATGTATG TTCGCAACTG TGCAATTGCT TTTCTGCCCC TATTACCTGA GGGAGTTCCA
GGGGCTATTT TCGCGGGTAT TGCATCACGA ATGCCATTTG CCCCTATACA TCCATCGGCA
ATGTTGTTAA TAATGGCCAC AGGCCAGACT CAACAGCTTA TTACATTATT CAAACAGTTA
CCCATACTCC CTGAAAAAGA AATCAATGAA ATAATAACTG CGCAGAATAG CGTTGGTACA
CCTGCTTTAT TTCTGGCTAT GATGAACGGA CATACTGACA ACGTAAAAAT ATTTATGCAA
GAAATTCAGT CACTGGTAGA TAATCATATC ATTCATGAAG ATAATCTGGT TAAATTACTG
CAAACTAAAA GTGCTAACGA AACACCTGGA CTCTATATCT CCATGTTGTA TGGATTCGAT
GAAATAATCG ATATCTTTCT GAATGCATTA ACCACTCCAA TAGCACAAGA TCTTTTAAAC
AAAAAAATGG TAATGAATAT TTTAGCAATG AAAACACGTG ATGGTGAGCC AGGATTATAT
GCCGCAATGG AAAATAATCA CCCTTTGTGT GTCACACGGT TCCTCTCTAA AGTTTATGGA
ATCGCTGTTA AATATAACCT CAGCAAAATT AACATCATGG ATTTATTAAA AGGCGCAACA
GCACATGGAA CCCCTGCTTT ATACATCGCC ATGAGCAAGG GTAATAAAGA CGTCGTGTTA
TCTTATATAT CAACGCTGGG TACTTTTGCA AAAAAATATT CTTTTAGTCA ATGTCAGTTA
TTCACATTGT TGGCCGCTAA AAATCATGAC AACATGTCAG CTGTTCATAT AGCCATTCAT
CATAATCATT ATAAAACTGT AGAAACATAT TATGCAGCTA TAAATGTAAT CAGCCAAAGC
CTGAGCTTTA GTCCAGATGA ACTACAGGCG TATTTATAA
|
|---|
| Protein sequence | MSQNDIIIRT HYKSPHRMHI DSDIPTPSSE PINQFARQLI TLLDTSDLSS MLTYCVTQEF
TANCRKISQN CYSTALFTIN FATSPIHAEN ILITLHYKKE IISLLLETTP IKANHLRSIL
DYIEQEQLTA ENRNHCMKLS KKIHREKTIQ PTVNLNGSAF FLQSPSDAIF CRHLSLQYAL
DSLRNGKGKV NLIKHYSSVE SIQQHVPLVR DAEFRSLLRH PPAGSRVIAS KDFGFALDIF
FCRMMANNVS HMSAILYIDN HTLSVRLRIK QSAYGQLNYV VSVYDPNDTN VAVRGTHRTA
RGFLSLDKFI SSGPDAQTWA DMYVRNCAIA FLPLLPEGVP GAIFAGIASR MPFAPIHPSA
MLLIMATGQT QQLITLFKQL PILPEKEINE IITAQNSVGT PALFLAMMNG HTDNVKIFMQ
EIQSLVDNHI IHEDNLVKLL QTKSANETPG LYISMLYGFD EIIDIFLNAL TTPIAQDLLN
KKMVMNILAM KTRDGEPGLY AAMENNHPLC VTRFLSKVYG IAVKYNLSKI NIMDLLKGAT
AHGTPALYIA MSKGNKDVVL SYISTLGTFA KKYSFSQCQL FTLLAAKNHD NMSAVHIAIH
HNHYKTVETY YAAINVISQS LSFSPDELQA YL
|
|---|
| |