| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1206 |
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| Symbol | |
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| ID | 6142895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1210145 |
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| End bp | 1212682 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641616083 |
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| Product | putative prophage side tail fiber protein |
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| Protein accession | YP_001743266 |
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| Protein GI | 170679883 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.116414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAG TAAAAATCTC AGGTGTGCTG AAAGATGGTG CGGGAAAACC AATACAGAAC
TGCACTATTC AACTGAAGGC AAAGCGTAAC AGCACCACGG TACTGGTGAA CACGGTGGCT
TCTGAAAATC CGGATGAAGC CGGACGTTAC AGCATGGATG TTGAGTATGG CCAGTACAGC
GTCACCCTGC TGGTTGAAGG TTTTCCGCCT TCACATGCCG GGACCATTAC CGTCTATGAA
GGTTCCAGAC CAGGTACGCT GAATGATTTT CTCGGTGCCA TGACGGAAGA TGATGTCATG
CCGGAGGCAT TGCGTCGTTT TGAGGCAATG GTGGAAGAAG CGGCACGCAA CGCCGAAGCC
GCCTCTCAGA GCGCAGCGGC GGCAAAGAAA TCCGAAACTG CAGCGGCATC ATCGAAGAAC
GCGGCGAAAA CCTCAGAAAC GAATGCAGCT AACAGCGCAC AGGCGGCAGC GACCTCACAG
ACTGCATCGG CAAACTCCGC GACAGCAGCC AAAAAATCAG AAACCAACGC GAAAAACAGC
GAGACAGCCG CAAAGACGAG CGAAACCAAC GCAAAGTCCA GCCAGACGGC AGCGAAGACC
AGCGAAACGA ATGCCAAAGC CAGTGAAACT GCGGCAAAAA ACAGCCAGGT TGCAGCAGCC
CAAAGCGAGA GCGCGGCAGC CGGTTCTGCG ACTTCAGCAG CCGGATCAGC AACTGCTGCG
GCTAACAGCC AGAAAGCTGC GAAGACGAGT GAAACTAACG CAAAGTCCAG CCAGACGGCA
GCGAAGACCA GCGAAACGAA TGCCAAAGCC AGTGAAACTG CGGCGAAAAA CAGTCAGGAT
GCTGCAGCCC AAAGCGAGAG TGCCGCAGCT GGTTCTGCAA GTGCGGCGGC TTCTTCTGCC
ACTGCATCAG CCAACAGTCA AAAAGCTGCA AAAACCAGTG AAACCAACGC AAAGGCGAGC
GAGACTGCGG CGGCTAACTC GGCGAAAGCA TCCGCTGCAA GCCAGACGGC TGCAAAAGCA
AGTGAAGACG CAGCCAGAGA GTATGCAAGC CAGGCTGCGG AGCCGTATAA ACAAGTTTTG
CAGCCGCTTC CCGATGTGTG GATACCGTTT AACGATTCAC TGGATATGAT TACGGGCTTT
TCGCCATCAT ATAAAAAGAT TGTTATTGGC GACGACGAAA TAACGATGCC TGGTGACAAG
GTTGTTAAGT TTAAACGCGC ATCGAAAGCA ACCTATATTA ATAAATCTGG TGTACTGACA
GAGGCTGCCA TTGACGAGCC GCGATTTGAA CGTGATGGCC TGCTTATTGA GGGGCAAAGA
ACTAATCTTC TGCTTAATTC AACAAATCCA TCTAAATGGA ATAAGTCAGG CAATCTGGAA
CTCACAGAAA TATCCACGGA TTCTTTTAAT TTTACTTATG GGAGATTTAC TGTAAAAGAT
ACTCTTATTG ATCAGACAAG TGCGATTAAT ATCGTAACGG TTTCTGGCAG TAAAGGATTT
GATGTCACAG GTGATGAAAA ATATGTGACC ATTTCATGCC GTGTCAGAAG TGATGTTGAA
AATATAAGGT GTCGTTTAAG ATTTGAACAT CATGATGGTT CTACTTACAC TTTTTTGGGA
GATGCTTACC TCAATTTATC AACACTTGTA ATTGATAAGA CTGGTGGTGC AGCAAATCGT
ATTATTGCAA AGGCTGTAAA AGATGAGGCT ACTGGTTGGA TTTTCTATCA GGCTACAATT
AATGCACTAG ATACAGAGAG CATGATTGGT GCGATGGTTC AATATGCTCC AGTAAAAGGT
TCAGGCACAG CATCTGGAGA CTATCTGGAT ATCGCAACTC CACAAGTGGA AGGTGGATCA
AGTGCTTCGT CATTTATTGT AACTGATATA ATTGCAAGCA CTCGCGCAAG CGATATGGTG
ACAGTCCCAA TCAAGAATAA CCTTTATAAT CTTCCTTTTA CAGTTCTTTG TGAGGTACAT
AAGAACTGGT ATAAAACGCC AAATGCAGCA CCGCGTGTTT TTGATACCGG CGGTCATCAA
ACCGGAGCGG CTATTATTCT TGGCTTCGGT CGTTCAACAG ATTACGACGG ATTTCCTTAT
TGCGATATAG GTTTGGCTAA CAGACGGGTA AACGAAAACG CATCGCTTGA AAAAATGGTT
ATGGGGATGC GTGTAAAGTC AGATCAGTCT ACGTGCTCAG TAAGTAACGG GCGTATATCC
AGCGAAAAGA AAGCCACATG GTCCTATATT CAGAACACCG CAATTATCCG TATTGGAGGC
CAGACTACAG CCGGGTTGCG TCATTTATTT GGTCATGTCA GGAATTTCAG AATATGGCAC
AAGGCATTGA CTGATGCTCA GGTGGGTGGA TTTGCCCCTA TATTTCCAGA CACCTGTTAT
CACTTAACCC ATTACTGGCC TGCTGCCGCA GATATTCCCG TGGCGAGCGA TAACCCAGTG
CACTATGCGG ATGCCATTCG TTATAATGCT CGAACGCCTC TGCAAGGTTC TTTGCTGCCG
TTAACCCGTC TGGTTTAG
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| Protein sequence | MAAVKISGVL KDGAGKPIQN CTIQLKAKRN STTVLVNTVA SENPDEAGRY SMDVEYGQYS
VTLLVEGFPP SHAGTITVYE GSRPGTLNDF LGAMTEDDVM PEALRRFEAM VEEAARNAEA
ASQSAAAAKK SETAAASSKN AAKTSETNAA NSAQAAATSQ TASANSATAA KKSETNAKNS
ETAAKTSETN AKSSQTAAKT SETNAKASET AAKNSQVAAA QSESAAAGSA TSAAGSATAA
ANSQKAAKTS ETNAKSSQTA AKTSETNAKA SETAAKNSQD AAAQSESAAA GSASAAASSA
TASANSQKAA KTSETNAKAS ETAAANSAKA SAASQTAAKA SEDAAREYAS QAAEPYKQVL
QPLPDVWIPF NDSLDMITGF SPSYKKIVIG DDEITMPGDK VVKFKRASKA TYINKSGVLT
EAAIDEPRFE RDGLLIEGQR TNLLLNSTNP SKWNKSGNLE LTEISTDSFN FTYGRFTVKD
TLIDQTSAIN IVTVSGSKGF DVTGDEKYVT ISCRVRSDVE NIRCRLRFEH HDGSTYTFLG
DAYLNLSTLV IDKTGGAANR IIAKAVKDEA TGWIFYQATI NALDTESMIG AMVQYAPVKG
SGTASGDYLD IATPQVEGGS SASSFIVTDI IASTRASDMV TVPIKNNLYN LPFTVLCEVH
KNWYKTPNAA PRVFDTGGHQ TGAAIILGFG RSTDYDGFPY CDIGLANRRV NENASLEKMV
MGMRVKSDQS TCSVSNGRIS SEKKATWSYI QNTAIIRIGG QTTAGLRHLF GHVRNFRIWH
KALTDAQVGG FAPIFPDTCY HLTHYWPAAA DIPVASDNPV HYADAIRYNA RTPLQGSLLP
LTRLV
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