Gene EcSMS35_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1077 
Symbol 
ID6147029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1092208 
End bp1092777 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content57% 
IMG OID641615964 
Producthypothetical protein 
Protein accessionYP_001743156 
Protein GI170679784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.371297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACA AATACAACCC CTTCTGGCAG CAACGTATTC GTGAGACGGT GCGGCACGCA 
CTGAATGTTC ATCCCCGCCT GACGGCATTG CGGGTTGACC TGCGTTTCCC GGATGTACCG
GCAGCAACGG ACGCAGCTGT GATATCCCGC TTCATCAATG CCCTGAAAGC CCGAATCGAC
GCTTACCAGA AACGTAAGCA TCGGGAAGGT AAACGCGTGC ATCCCACAAC CCTGCATTAC
GTCTGGGCCC GGGAGTTTGG GGAGTGCAAA GGTAAAAAAC ACTATCACCT GATGCTGCTG
GTTAACCGGG ATACCTGGTG TCGTGCCGGT GATTACCGTG CTCCGGGATC ACTGGCCGGG
ATGATTAAAC AGGCGTGGTG CAGTGCCCTG GGAGTGGATG TCGGGTGCCA TGCCACGCTG
GTGCATTTTC CGGCCTGGCC GGCGGTGTGG CTGGAACGCG ATGATGACAC TGGCTTTCAG
CAGGTGCTGG AACGTGCTGA CTATCTGGCG AAGGAACATA CCAAAGCTCA CTGCACCGGT
GAGCGCAATT TTGGCTGTAG CCGGAGTTGA
 
Protein sequence
MTYKYNPFWQ QRIRETVRHA LNVHPRLTAL RVDLRFPDVP AATDAAVISR FINALKARID 
AYQKRKHREG KRVHPTTLHY VWAREFGECK GKKHYHLMLL VNRDTWCRAG DYRAPGSLAG
MIKQAWCSAL GVDVGCHATL VHFPAWPAVW LERDDDTGFQ QVLERADYLA KEHTKAHCTG
ERNFGCSRS