Gene EcSMS35_0948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0948 
Symbol 
ID6147408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp962241 
End bp962666 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content60% 
IMG OID641615835 
Productsingle-strand binding protein family 
Protein accessionYP_001743027 
Protein GI170683723 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAC AGATAGCGGC TTACGGGCGG CTGGTGGCTG ACCCGCAGTT AAAGACCACC 
AGCAAGGGTA CACAAATGAC GATGGCTAGT ATGGCGGTCC CCCTTCCGTG CAGCCAGGCA
GATGACGGAA CGGCGATGAT GTGGTTATCC GTCCTGGCGT TTGGCAGACA GGCCGACGCA
CTGGCAAAAC ACCACAAAGG CGAACTGGTG AGCGTGGCGG GTAACATGCA GGTAAGCCAG
TGGACAGGCC AGAACGGCGA AACGCGGCAG GGCTGGCAGG TTATCGCAGA CAGCGTGATC
AGTGCGCGAA CAGCGCGACC GGGCGGCAAA AAAGGCCAGC AGGGGCAGGC CACTGACGCA
CTGAACAGGG CAAAACAGCA GACGGGTCAG CACGATGATC CGTACGGGGA CAACATACCG
TTTTAG
 
Protein sequence
MTAQIAAYGR LVADPQLKTT SKGTQMTMAS MAVPLPCSQA DDGTAMMWLS VLAFGRQADA 
LAKHHKGELV SVAGNMQVSQ WTGQNGETRQ GWQVIADSVI SARTARPGGK KGQQGQATDA
LNRAKQQTGQ HDDPYGDNIP F