Gene EcHS_A4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A4538 
SymbolfimB 
ID5593503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand+ 
Start bp4545960 
End bp4546562 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content43% 
IMG OID640923634 
Producttyrosine recombinase 
Protein accessionYP_001461074 
Protein GI157163756 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0000945122 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATA AGGCTGATAA CAAAAAAAGG AACTTCCTGA CCCATAGTGA AATCGAATCA 
CTCCTTAAAG CAGCCAATAC CGGGCCTCAT GCAGCACGTA ATTATTGTCT GACTTTGCTT 
TGTTTTATTC ATGGTTTCCG GGCGAGTGAA ATTTGTCGAT TGAGGATTTC GGATATTGAT 
CTTAAGGCAA AGTGTATATA TATCCATCGA TTAAAAAAAG GCTTTTCAAC AACGCATCCG 
CTATTGAACA AAGAAGTTCA GGCTTTAAAA AACTGGTTGA GTATCCGTAC TTCGTACCCG 
CATGCTGAGA GCGAGTGGGT ATTTTTATCT CGTAAGGGAA ATCCGCTTTC TCGGCAACAG 
TTTTACCATA TTATCTCGAC TTCCGGTGGT AATGCCGGGT TGTCACTGGA GATTCATCCG 
CACATGTTAC GCCATTCGTG TGGTTTTGCT TTGGCGAATA TGGGAATAGA TACGCGACTT 
ATCCAGGATT ATCTTGGGCA TCGCAATATT CGTCATACTG TCTGGTATAC CGCCAGCAAT 
GCAGGGCGTT TTTACGGCAT CTGGGATAGA GCCAGAGGAC GACAGCGTCA CGCTGTTTTA 
TAG
 
Protein sequence
MKNKADNKKR NFLTHSEIES LLKAANTGPH AARNYCLTLL CFIHGFRASE ICRLRISDID 
LKAKCIYIHR LKKGFSTTHP LLNKEVQALK NWLSIRTSYP HAESEWVFLS RKGNPLSRQQ 
FYHIISTSGG NAGLSLEIHP HMLRHSCGFA LANMGIDTRL IQDYLGHRNI RHTVWYTASN 
AGRFYGIWDR ARGRQRHAVL