Gene EcHS_A4326 details

Gene Information

• Locus tag: EcHS_A4326
• Symbol: mdtO
• ID: 5591764
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli HS
• Kingdom: Bacteria
• Replicon accession: NC_009800
• Strand: -
• Start bp: 4332229
• End bp: 4334280
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640923424
• Product: multidrug efflux system protein MdtO
• Protein accession: YP_001460869
• Protein GI: 157163551
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 62
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGC TCAACTCCCT GCCATTACCG GTGGTCAGGC TGCTGGCGTT CTTTCATGAA 
GAGTTAAGCG AGCGGCGACC CGGCCGCGTG CCGCAGATCG TGCAACTCTG GGTAGGCTGC 
CTGCTGGTGA TTCTGATCTC GATGACTTTT GAGATCCCTT TTGTGGCGTT ATCGCTGGCA 
GTGCTGTTTT ACGGTATTCA GTCGAACGCG TTTTACACCA AATTTGTCGC GATCTTGTTT 
GTGGTTGCCA CGGTGCTGGA GATCGGCAGC CTGTTTTTGA TCTACAAATG GTCATACGGC 
GAACCGTTGA TCCGATTGAT CATCGCCGGG CCGATCCTGA TGGGCTGTAT GTTTTTGATG 
CGCACCCATC GGCTGGGACT GGTCTTTTTC GCCGTCGCCA TTGTCGCCAT TTACGGGCAA 
ACCTTCCCCG CCATGCTCGA CTATCCGGAA GTGGTCGTGC GCTTAACGCT ATGGTGTATC 
GTTGTTGGCC TCTATCCAAC CTTGCTGATG ACGTTAATCG GCGTGCTGTG GTTTCCCAGT 
CGTGCCATTT CGCAAATGCA TCAGGCGCTT AATGATCGGC TTGATGATGC CATTAGCCAC 
CTGACGGACA GCCTCGCACC GCTACCCGAA ACGCGGATTG AAAGAGAGGC GCTGGCGCTG 
CAAAAACTGA ATGTCTTTTG TCTCGCGGAC GATGCCAACT GGCGAACTCA AAGCGCATGG 
TGGCAAAGCT GCGTGGCAAC GGTAACCTAC ATTTACTCGA CGCTGAATCG CTACGATCCC 
ACCTCTTTTG CTGATTCTCA GGCAATTATT GAATTTCGGC AAAAATTAGC CTCAGAAATC 
AATAAGCTGC AGCATGCCGT TGCTGAAGGT CAGTGCTGGC AAAGCGACTG GCGGATCACT 
GAAAGTGAAG CGATGGCGGC ACGGGAATGT AACCTGGAGA ATATCTGCCA GACGTTGTTA 
CAACTGGGCC AGATGGACCC GAATACGCCG CCAACGCCCG CCGCCAAACC GCCATCAATG 
GTCGCCGATG CTTTTACCAA TCCAGACTAT ATGCGCTACG CGGTAAAAAC ACTGCTCGCC 
TGTTTGATCT GTTACACCTT CTACAGCGGC GTGGACTGGG AAGGCATTCA CACCTGTATG 
CTGACATGCG TGATCGTCGC TAACCCAAAT GTCGGTTCGT CGTACCAGAA GATGGTGCTG 
CGTTTTGGCG GGGCCTTTTG CGGCGCGATT CTGGCGCTGT TATTCACGCT ACTGGTCATG 
CCCTGGCTGG ACAATATTGT CGAATTGCTG TTTGTGCTGG CACCGATTTT CCTGTTGGGC 
GCATGGATTG CCACCAGCTC TGAACGCTCT TCTTATATCG GCACACAGAT GGTGGTCACC 
TTCGCGCTCG CCACGCTCGA AAACGTTTTT GGCCCGGTGT ACGACCTGGT GGAAATTCGC 
GATCGCGCCA TGGGTATCAT CATTGGTACC GTGGTGTCCG CGGTGATTTA CACCTTTGTC 
TGGCCTGAAA GTGAAGCGCG CACACTGCCG CAAAAACTGG CTGGCACGCT GGGTATGTTA 
AGTAAAGTAA TGCGGATCCC ACGCCAGCAG GAAGTCACGG CTCTGCGCAC TTATCTGCAA 
ATTCGTATCG GTCTGCATGC GGCGTTTAAT GCCTGTGAAG AGATGTGCCA ACGCGTGGCG 
CTGGAGCGTC AACTGGACAG CGAAGAACGC GCCTTACTGA TTGAACGTTC GCAAACGGTT 
ATTCGTCAGG GCCGCGATCT TCTTCACGCC TGGGATGCCA CCTGGAACTC GGCGCAGGCG 
CTGGATAACG CACTACAGCC GGACAGAGCA GCTCAGTTTG CCGACGCCCT GGAGAAATAC 
GCTGCCGGTC TGGCAACCGC ACTCAGCCGT TCTCCTCAAA TAACGCTTGA AGAGACACCC 
GCCTCGCAGG CCATCCTGCC CACCTTATTA AAACAGGAGC AACACGTCTG CCAGCTTTTC 
GCCCGCTTGC CAGACTGGAC AGCCCCGGCA TTAACGCCCG CCACGGAACA GGCACAAGGA 
GCCACGCAAT GA 

 

Protein sequence

MSALNSLPLP VVRLLAFFHE ELSERRPGRV PQIVQLWVGC LLVILISMTF EIPFVALSLA 
VLFYGIQSNA FYTKFVAILF VVATVLEIGS LFLIYKWSYG EPLIRLIIAG PILMGCMFLM 
RTHRLGLVFF AVAIVAIYGQ TFPAMLDYPE VVVRLTLWCI VVGLYPTLLM TLIGVLWFPS 
RAISQMHQAL NDRLDDAISH LTDSLAPLPE TRIEREALAL QKLNVFCLAD DANWRTQSAW 
WQSCVATVTY IYSTLNRYDP TSFADSQAII EFRQKLASEI NKLQHAVAEG QCWQSDWRIT 
ESEAMAAREC NLENICQTLL QLGQMDPNTP PTPAAKPPSM VADAFTNPDY MRYAVKTLLA 
CLICYTFYSG VDWEGIHTCM LTCVIVANPN VGSSYQKMVL RFGGAFCGAI LALLFTLLVM 
PWLDNIVELL FVLAPIFLLG AWIATSSERS SYIGTQMVVT FALATLENVF GPVYDLVEIR 
DRAMGIIIGT VVSAVIYTFV WPESEARTLP QKLAGTLGML SKVMRIPRQQ EVTALRTYLQ 
IRIGLHAAFN ACEEMCQRVA LERQLDSEER ALLIERSQTV IRQGRDLLHA WDATWNSAQA 
LDNALQPDRA AQFADALEKY AAGLATALSR SPQITLEETP ASQAILPTLL KQEQHVCQLF 
ARLPDWTAPA LTPATEQAQG ATQ