Gene EcHS_A3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcHS_A3238 
Symbol 
ID5593082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli HS 
KingdomBacteria 
Replicon accessionNC_009800 
Strand
Start bp3248713 
End bp3249162 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content51% 
IMG OID640922356 
Producttranscriptional regulator, truncation 
Protein accessionYP_001459852 
Protein GI157162534 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.214454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAAAAA ATAAAAGAAT ATTATGCGCA GCACCTGAGT ATCTGCAAAA ATATCCGCAG 
CCACAATCCC TACAGGAATT AAGTCGTCAT GACTGTCTGG TGACCAAAGA GCGCGATATG
ACCCATGGAA TATGGGAGTT GGGGAACGGT CAGGAGAAAA AATCGGTGAA GGTAAGCGGG
CATCTTTCCT CCAATAGCGG CGAGATTGTG CTGCAATGGG CGCTGGAGGG CAAAGGGATT
ATGCTGCGTT CCGAGTGGGA TGTGTTGCCG TTTCTGGAGA GTGGCAAACT GGTGCAAGTA
TTGCCAGAGT ATGCACAAAG CGCCAATATC TGGGCTGTTT ACCGGGAGCC GCTCTATCGC
AGCATGAAAT TACGTGTCTG CGTGGAATTT CTGGCGGCAT GGTGCCAGCA ACGGCTGGGC
AAGCCCGATG AAGGCTATCA GGTCATGTAG
 
Protein sequence
MTKNKRILCA APEYLQKYPQ PQSLQELSRH DCLVTKERDM THGIWELGNG QEKKSVKVSG 
HLSSNSGEIV LQWALEGKGI MLRSEWDVLP FLESGKLVQV LPEYAQSANI WAVYREPLYR
SMKLRVCVEF LAAWCQQRLG KPDEGYQVM