| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A1267 |
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| Symbol | |
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| ID | 5595496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli HS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009800 |
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| Strand | + |
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| Start bp | 1268050 |
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| End bp | 1269570 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640920427 |
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| Product | hypothetical protein |
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| Protein accession | YP_001457989 |
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| Protein GI | 157160671 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0117469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA AAAAACTCTC CGGGTTTAGT TTGGGACTTA TTGCTCTGGC GGTGGGTAAT
GCATATGCAA CACAATTGTT GGATGATTAT AGTATAATTT CCTATATGAC TGATGAAGAA
TCGCCGATTG AAATCAAAGA TAATAATCCG ATAAGTAATG GAGAGTATCT AACCACTGAA
GACGAAAGCC ATGCTGTGAA AGTGGATGAC GGTGTAACTG GATATATAAA TAATGCCAGT
GTGATGACTA GTGGTGATGG ATCTTATGGT ATTTCTGTTG ATAGTCAAAA CAAAGTATTA
TATATAAGCG ATAGCGATAT TAAGACCTCT GGAAGCGTAT CTGACAAAGA AAATGGAGGG
ATAACAGCCA GCGCAGTAGT CAGTGAATTT GGTGGCACCA TCTTTATGAA TGGTGATAAT
TCAGTCGAGT CGGGTGGGGC ATATTCAGCG GGACTTTTAA GCCAGGTTAA TGATTCTGAA
AAGATGGTAA ATAACACCCG TCTTGAAACC ACAGATAAAA CGAACATTGT TACCTCTGGG
GAAAATGCAG TAGGTGTTCT TGCATGTTCA AGTCCTGGAG AGTCTCGAAC ATGTGTCGAT
GCTGTAGATG ATGAAGTTAG TGATTCTAAC AGTTACGAAG TTATTAGCCG TGCTGATTTA
AAAATGAATG GTGGTTCCAT AACAACTAAT GGCATTAATA GCTATGGTGC TTATGCTAAT
GGGAAAAAAG CATATATTAA TTTAGATTAT GTGGCACTTG AAACTGTGGC TGATGGAAGT
TATGCAGTTG CTATTCGACA AGGTAACATT GATATAAAAA ATAGTTCTAT TACAACAACA
GGCACTAAAG CCCCCATTGC AAAAATATAC AATGGTGGAG AGTTATTTTT TTCCAATGTC
ACCGCGGTAT CAAAACAAGA TAAAGGAATA TCAATTGATG CATCAAATAT CGATTCTCAA
GCCAAAATAG CACTATTAAG TGTTGAACTT TCAAGTGCTT TGGATAGTAT TGATGTTAAC
AAAACTACAA CGGATGTAAG TATCCTTAAT CGAAGTATTA TCACACCTGG TAATAATGTT
CTGGTTAATA ATACTGGAGG TGACTTAAAC ATAATTTCGT CCGACTCTAT TCTAAATGGA
GCGACTAAAC TCGTCAGCGG CACAACCACG CTGAAGCTTT CAGAAAATAC AATCTGGAAT
ATGAAAGATG ACTCCGTTGT TACCCATCTG ACTAATTCAG ACAGTATTAT CAATCTTTCG
TATGATGATG GTCAAACATT TACCCAAGGA AAAACATTAA CCGTAAAAGG TAATTATGTC
GGTAATAATG GTCAGCTTAA TATCCGCACC GTATTAGGTG ATGATAAATC GGCTACGGAC
AGACTTATTG TTGAGGGTAA TACTTCGGGT TCAACTACCG TCTATGTGAA AAATGCTGGA
GGAAGCGGCG CGGCCACGCT AAACGGGATC GAACTCATAA CTGTGAATGG CGATGAATCT
CCAGCAGATG CCTTCAGATA A
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| Protein sequence | MKLKKLSGFS LGLIALAVGN AYATQLLDDY SIISYMTDEE SPIEIKDNNP ISNGEYLTTE
DESHAVKVDD GVTGYINNAS VMTSGDGSYG ISVDSQNKVL YISDSDIKTS GSVSDKENGG
ITASAVVSEF GGTIFMNGDN SVESGGAYSA GLLSQVNDSE KMVNNTRLET TDKTNIVTSG
ENAVGVLACS SPGESRTCVD AVDDEVSDSN SYEVISRADL KMNGGSITTN GINSYGAYAN
GKKAYINLDY VALETVADGS YAVAIRQGNI DIKNSSITTT GTKAPIAKIY NGGELFFSNV
TAVSKQDKGI SIDASNIDSQ AKIALLSVEL SSALDSIDVN KTTTDVSILN RSIITPGNNV
LVNNTGGDLN IISSDSILNG ATKLVSGTTT LKLSENTIWN MKDDSVVTHL TNSDSIINLS
YDDGQTFTQG KTLTVKGNYV GNNGQLNIRT VLGDDKSATD RLIVEGNTSG STTVYVKNAG
GSGAATLNGI ELITVNGDES PADAFR
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