| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcE24377A_3062 |
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| Symbol | cse1 |
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| ID | 5590399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli E24377A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009801 |
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| Strand | - |
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| Start bp | 3061527 |
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| End bp | 3063089 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640926706 |
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| Product | CRISPR-associated Cse1 family protein |
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| Protein accession | YP_001464082 |
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| Protein GI | 157156933 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCGT TTTCACTTCT GACAACCCCG TGGTTGCCTG TTCGTTTTAA AGACGGAACG
ACAGGCAAGC TGGCACCAGT CGATCTGGCT GATGAAAATG TTGTCGATAT CGCTGCGCCG
CGGGCAGATC TCCAGGGTGC GGCCTGGCAG TTTTTGCTGG GGCTACTACA AACCAGCTTC
GCGCCCAAAA ATCACGGTCG TTGGGATGAT ATCTGGGAAG ACGGACTGGA GGCTGAAAAG
CTACGGGAAG CATTGCTGTC CTTAGAACAC GCTTTCCAGT TTGGGGCAGA TTCCCCTTCA
TTTATGCAGG ATTTCGAGGC GCTCAAGGGA GATAAAGTTC AGGTCGCTTC GCTACTGCCT
GAGATTCCCG GCGCTCAAAC AACGAAGTTT AATAAAGACC ACTTTATTAA GCGTGGCGTG
ACTGAACACG TATGCCCTCA TTGTTCCGCG TTAGCTCTGT TCTCCCTACA GTTAAATGCG
CCATCAGGCG GCAAAGGCTA TCGCACCGGT TTGCGCGGCG GTGGGCCGAT GACCACTCTG
ATTGAATTAC AGGAATATCA AGGCAATCAA CAAACGCCCT TGTGGCGCAA ACTGTGGCCC
AATGTGATGC CGCAGGATGA AGCCGACTTA CCGCTACCCA AAAAATTTGA CGATCTGGTT
TTCCCCTGGC TTGGCCCGAC GCGAACCAGC GAACTGGCCG GTGCGGTGGT AACCCATGAT
CAGGTCAATA AACTCCAGGC TTACTGGGGA ATGCCGCGCC GTATTCGTAT TGATTTTAAT
ACCACGACAG TCGGCAACTG CGATATTTGC GGTGAACAGA GCGACGCGCT CCTGAGCCTG
ATGACGACCA AAAATTACGG TGCGAATTAT GCCATGTGGC AGCATCCCTT AACGCCTTAC
CGTATACCAC TTAAAGAGGG TGGCGAGTTT TACTCGGTCA AACCACAACC GGGCGGTTTA
ATCTGGCGCG ACTGGTTAGG CCTTATCGAA ACGGGTAAAT CAGAAAACAA TACGGAACTT
CCCGCGCTGG TGGTGAAACT CTTTAATGCC AGCAGTCTGA AACAGGCAAA AGTAGGCCTG
TGGGGATTTG GCTATGATTT CGACAACATG AAAGCGCGCT GTTGGTACGA ACACCATTTC
CCGCTGCTGC TCAAGAAAAA AGAAGGCCAG ATACCGAAAC TGCGTCTGGC TGCGCAAACG
GCTTCACGGA TTCTAAGTCT GTTACGAAGT GCATTGAAAG AAGCGTGGTT CTCCGATCCA
AAAGGTGCAC GGGGTGATTT CAGTTTTGTG GATATCGACT TCTGGAACAA AACTCAGCAT
CGCTTCCTGA GGTTAGTGCG CCAAATTGAA GAAGGTCAGG ATGCGGACGA ATTACTCGGC
AAATGGCAAA AGGAAATTTG GTTATTCGCG CGTCAGGATT TTGACGAGCG TGTATTCACC
AATCCATATG AGCCTGTTGA TTTGAAACGC GTTATGACCG CGCGCAAGAA ATATTTCACA
ACATCGGCGG AGAAGCAAAG TGCTAAAGCC GCCAGGGAGA AAAAGCAGGA GGCTGCTGAA
TGA
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| Protein sequence | MNSFSLLTTP WLPVRFKDGT TGKLAPVDLA DENVVDIAAP RADLQGAAWQ FLLGLLQTSF
APKNHGRWDD IWEDGLEAEK LREALLSLEH AFQFGADSPS FMQDFEALKG DKVQVASLLP
EIPGAQTTKF NKDHFIKRGV TEHVCPHCSA LALFSLQLNA PSGGKGYRTG LRGGGPMTTL
IELQEYQGNQ QTPLWRKLWP NVMPQDEADL PLPKKFDDLV FPWLGPTRTS ELAGAVVTHD
QVNKLQAYWG MPRRIRIDFN TTTVGNCDIC GEQSDALLSL MTTKNYGANY AMWQHPLTPY
RIPLKEGGEF YSVKPQPGGL IWRDWLGLIE TGKSENNTEL PALVVKLFNA SSLKQAKVGL
WGFGYDFDNM KARCWYEHHF PLLLKKKEGQ IPKLRLAAQT ASRILSLLRS ALKEAWFSDP
KGARGDFSFV DIDFWNKTQH RFLRLVRQIE EGQDADELLG KWQKEIWLFA RQDFDERVFT
NPYEPVDLKR VMTARKKYFT TSAEKQSAKA AREKKQEAAE
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