| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3857 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 4151273 |
|---|
| End bp | 4151848 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | ACX41459 |
|---|
| Protein GI | 260451037 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAACGTG AAGATGTACT GGGAGAAGCC CTGAAATTAT TAGAATTACA AGGGATTGCC
AACACCACGC TGGAGATGGT TGCTGAACGT GTGGATTATC CACTGGACGA GCTACGCCGC
TTCTGGCCAG ACAAAGAGGC AATCCTCTAC GATGCGCTGC GTTATCTTAG CCAACAGATA
GATGTCTGGC GTCGTCAGCT GATGCTGGAC GAAACGCAAA CCGCCGAACA AAAGCTGCTG
GCACGTTATC AGGCGTTATC GGAGTGCGTT AAAAACAACC GCTATCCGGG CTGTCTATTT
ATCGCTGCCT GTACGTTTTA TCCCGATCCT GGCCACCCTA TTCATCAACT GGCCGATCAG
CAAAAAAGCG CGGCCTACGA TTTCACCCAC GAACTGTTAA CCACACTGGA AGTTGACGAT
CCGGCGATGG TAGCAAAGCA GATGGAACTG GTGCTGGAAG GCTGTTTAAG CCGAATGCTG
GTGAATCGTA GCCAGGCGGA TGTCGACACT GCACATCGGC TGGCGGAAGA TATCCTGCGC
TTCGCCCGCT GCCGCCAGGG TGGTGCATTG ACCTGA
|
|---|
| Protein sequence | MQREDVLGEA LKLLELQGIA NTTLEMVAER VDYPLDELRR FWPDKEAILY DALRYLSQQI
DVWRRQLMLD ETQTAEQKLL ARYQALSECV KNNRYPGCLF IAACTFYPDP GHPIHQLADQ
QKSAAYDFTH ELLTTLEVDD PAMVAKQMEL VLEGCLSRML VNRSQADVDT AHRLAEDILR
FARCRQGGAL T
|
|---|
| |