| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3677 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3963319 |
|---|
| End bp | 3964221 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | FimH mannose-binding domain protein |
|---|
| Protein accession | ACX41288 |
|---|
| Protein GI | 260450866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.376605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGAG TTATTACCCT GTTTGCTGTA CTGCTGATGG GCTGGTCGGT AAATGCCTGG
TCATTCGCCT GTAAAACCGC CAATGGTACC GCTATCCCTA TTGGCGGTGG CAGCGCCAAT
GTTTATGTAA ACCTTGCGCC CGTCGTGAAT GTGGGGCAAA ACCTGGTCGT GGATCTTTCG
ACGCAAATCT TTTGCCATAA CGATTATCCG GAAACCATTA CAGACTATGT CACACTGCAA
CGAGGCTCGG CTTATGGCGG CGTGTTATCT AATTTTTCCG GGACCGTAAA ATATAGTGGC
AGTAGCTATC CATTTCCTAC CACCAGCGAA ACGCCGCGCG TTGTTTATAA TTCGAGAACG
GATAAGCCGT GGCCGGTGGC GCTTTATTTG ACGCCTGTGA GCAGTGCGGG CGGGGTGGCG
ATTAAAGCTG GCTCATTAAT TGCCGTGCTT ATTTTGCGAC AGACCAACAA CTATAACAGC
GATGATTTCC AGTTTGTGTG GAATATTTAC GCCAATAATG ATGTGGTGGT GCCTACTGGC
GGCTGCGATG TTTCTGCTCG TGATGTCACC GTTACTCTGC CGGACTACCC TGGTTCAGTG
CCAATTCCTC TTACCGTTTA TTGTGCGAAA AGCCAAAACC TGGGGTATTA CCTCTCCGGC
ACAACCGCAG ATGCGGGCAA CTCGATTTTC ACCAATACCG CGTCGTTTTC ACCTGCACAG
GGCGTCGGCG TACAGTTGAC GCGCAACGGT ACGATTATTC CAGCGAATAA CACGGTATCG
TTAGGAGCAG TAGGGACTTC GGCGGTGAGT CTGGGATTAA CGGCAAATTA TGCACGTACC
GGAGGGCAGG TGACTGCAGG GAATGTGCAA TCGATTATTG GCGTGACTTT TGTTTATCAA
TAA
|
|---|
| Protein sequence | MKRVITLFAV LLMGWSVNAW SFACKTANGT AIPIGGGSAN VYVNLAPVVN VGQNLVVDLS
TQIFCHNDYP ETITDYVTLQ RGSAYGGVLS NFSGTVKYSG SSYPFPTTSE TPRVVYNSRT
DKPWPVALYL TPVSSAGGVA IKAGSLIAVL ILRQTNNYNS DDFQFVWNIY ANNDVVVPTG
GCDVSARDVT VTLPDYPGSV PIPLTVYCAK SQNLGYYLSG TTADAGNSIF TNTASFSPAQ
GVGVQLTRNG TIIPANNTVS LGAVGTSAVS LGLTANYART GGQVTAGNVQ SIIGVTFVYQ
|
|---|
| |