| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3301 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 3550954 |
|---|
| End bp | 3552279 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | pyridine nucleotide-disulphide oxidoreductase dimerization region |
|---|
| Protein accession | ACX40925 |
|---|
| Protein GI | 260450503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAT ATCAGGCAGT GATTATTGGT TTTGGCAAGG CTGGAAAAAC ATTAGCCGTC
ACGCTGGCAA AAGCAGGTTG GCGAGTGGCT CTCATCGAAC AATCAAATGC AATGTATGGC
GGGACCTGTA TTAATATCGG CTGCATCCCA ACCAAAACAT TGGTTCATGA CGCACAGCAG
CACACAGATT TTGTCCGTGC CATACAGCGT AAAAATGAAG TGGTTAATTT TTTACGTAAT
AAGAATTTTC ATAATCTTGC GGATATGCCC AATATCGACG TGATCGACGG CCAGGCGGAG
TTTATCAATA ATCATAGCCT GCGTGTTCAT CGGCCTGAGG GAAATCTGGA AATTCATGGC
GAGAAAATTT TTATTAATAC CGGTGCACAA ACCGTGGTTC CGCCAATTCC TGGAATTACC
ACCACGCCAG GAGTATATGA CAGCACCGGA TTACTTAATC TAAAAGAATT GCCTGGGCAT
TTAGGTATTT TGGGCGGCGG ATATATTGGC GTTGAGTTCG CCTCTATGTT CGCTAATTTT
GGCAGCAAGG TAACCATTTT AGAAGCAGCT TCGCTGTTTT TGCCTCGGGA AGATCGGGAT
ATTGCTGATA ATATCGCGAC GATTTTACGC GATCAGGGCG TCGATATTAT CCTCAATGCC
CATGTGGAGC GAATCAGTCA CCATGAAAAT CAAGTGCAAG TGCATAGCGA GCACGCCCAA
CTGGCGGTGG ATGCACTGTT AATAGCTTCC GGTCGTCAAC CGGCTACCGC TTCGTTACAT
CCAGAAAATG CCGGTATCGC AGTAAACGAG CGCGGGGCAA TTGTCGTTGA CAAGCGATTA
CATACCACCG CAGACAATAT TTGGGCGATG GGAGATGTTA CCGGCGGGCT GCAATTTACT
TACATATCAC TGGATGATTA CCGCATTGTA CGTGATGAGT TACTGGGTGA AGGCAAACGT
AGTACTGATG ATCGGAAAAA TGTGCCTTAT TCCGTATTTA TGACACCGCC CCTGTCCAGG
GTTGGTATGA CAGAAGAACA AGCCAGAGAG AGTGGTGCTG ATATTCAGGT GGTGACATTG
CCTGTAGCTG CAATTCCGCG TGCCAGAGTG ATGAATGATA CTCGTGGGGT ATTAAAAGCG
ATTGTTGATA ATAAAACCCA ACGTATGTTA GGGGCATCAC TGCTGTGTGT TGACTCCCAC
GAGATGATCA ATATAGTGAA AATGGTGATG GATGCCGGGC TGCCTTATAG CATATTACGC
GATCAGATAT TTACTCATCC GTCGATGAGC GAATCACTCA ATGATCTATT TTCATTAGTC
AAATAA
|
|---|
| Protein sequence | MNKYQAVIIG FGKAGKTLAV TLAKAGWRVA LIEQSNAMYG GTCINIGCIP TKTLVHDAQQ
HTDFVRAIQR KNEVVNFLRN KNFHNLADMP NIDVIDGQAE FINNHSLRVH RPEGNLEIHG
EKIFINTGAQ TVVPPIPGIT TTPGVYDSTG LLNLKELPGH LGILGGGYIG VEFASMFANF
GSKVTILEAA SLFLPREDRD IADNIATILR DQGVDIILNA HVERISHHEN QVQVHSEHAQ
LAVDALLIAS GRQPATASLH PENAGIAVNE RGAIVVDKRL HTTADNIWAM GDVTGGLQFT
YISLDDYRIV RDELLGEGKR STDDRKNVPY SVFMTPPLSR VGMTEEQARE SGADIQVVTL
PVAAIPRARV MNDTRGVLKA IVDNKTQRML GASLLCVDSH EMINIVKMVM DAGLPYSILR
DQIFTHPSMS ESLNDLFSLV K
|
|---|
| |