Gene EcDH1_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2090 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2238421 
End bp2238954 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content51% 
IMG OID 
ProductLysozyme 
Protein accessionACX39746 
Protein GI260449324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00497326 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAA AAATCAGATA CGGCCTGTCG GCTGCCGTTC TGGCGCTGAT TGGTGCTGGC 
GCATCTGCTC CTCAGATACT TGACCAGTTT CTGGACGAAA AAGAAGGTAA CCACACAATG
GCATACCGCG ATGGTTCTGG CATATGGACC ATCTGTCGGG GTGCCACAGT GGTGGATGGA
AAAACCGTTT TTCCCAATAT GAAACTGTCG AAGGAAAAAT GCGACCAGGT CAACGCCATT
GAGCGTGATA AGGCGCTGGC ATGGGTGGAG CGCAATATTA AAGTACCACT GACCGAACCA
CAAAAAGCGG GTATCGCGTC ATTTTGTCCC TATAACATTG GCCCCGGTAA GTGTTTCCCG
TCGACGTTTT ATAAGCGGCT GAATGCTGGT GATCGTAAAG GTGCATGCGA AGCGATTCGC
TGGTGGATTA AGGATGGCGG ACGCGATTGC CGCATTCGTT CAAATAACTG TTACGGTCAG
GTTATTCGTC GTGACCAGGA GAGCGCATTA ACCTGCTGGG GGATAGAACA GTGA
 
Protein sequence
MNTKIRYGLS AAVLALIGAG ASAPQILDQF LDEKEGNHTM AYRDGSGIWT ICRGATVVDG 
KTVFPNMKLS KEKCDQVNAI ERDKALAWVE RNIKVPLTEP QKAGIASFCP YNIGPGKCFP
STFYKRLNAG DRKGACEAIR WWIKDGGRDC RIRSNNCYGQ VIRRDQESAL TCWGIEQ