| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1977 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 2133648 |
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| End bp | 2135021 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | MATE efflux family protein |
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| Protein accession | ACX39634 |
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| Protein GI | 260449212 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000001739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGAAGT ATATCAGTGA AGCGCGTCTG TTATTAGCAT TAGCAATCCC GGTGATTCTC
GCGCAAATCG CCCAAACTGC GATGGGTTTT GTCGATACCG TGATGGCGGG CGGCTATAGT
GCCACCGACA TGGCGGCGGT CGCTATCGGT ACTTCTATCT GGCTTCCGGC GATCCTCTTT
GGTCACGGAC TGCTGCTGGC ATTAACGCCG GTTATCGCGC AATTAAATGG TTCCGGTCGA
CGTGAGCGCA TTGCGCATCA GGTGCGACAA GGTTTCTGGC TGGCAGGTTT TGTTTCCGTT
CTCATTATGC TGGTGCTGTG GAATGCAGGT TACATTATCC GCTCCATGGA AAACATCGAT
CCGGCTCTGG CGGACAAAGC CGTGGGTTAT CTGCGTGCGT TGTTGTGGGG CGCGCCGGGA
TATCTGTTCT TCCAGGTTGC CCGTAACCAG TGTGAAGGTC TGGCAAAAAC CAAGCCGGGT
ATGGTAATGG GCTTTATCGG CCTGCTGGTG AACATCCCGG TGAACTATAT CTTTATTTAT
GGTCATTTCG GTATGCCTGA GCTCGGTGGC GTTGGTTGTG GCGTGGCTAC TGCGGCGGTG
TATTGGGTCA TGTTCCTTGC CATGGTTTCT TACATTAAAC GCGCCCGCTC CATGCGCGAT
ATTCGTAACG AAAAAGGCAC CGCAAAACCC GATCCTGCGG TTATGAAACG ACTGATTCAA
CTCGGTTTGC CGATTGCGCT GGCACTGTTC TTTGAAGTGA CACTGTTTGC CGTCGTGGCT
CTGTTAGTGT CTCCGCTCGG TATTGTTGAT GTCGCAGGAC ACCAGATTGC CCTGAACTTT
AGTTCACTAA TGTTCGTGCT TCCAATGTCG CTGGCGGCAG CGGTAACTAT CCGCGTAGGT
TATCGTCTGG GTCAGGGCTC AACGCTGGAT GCGCAAACCG CTGCGCGGAC CGGGCTTATG
GTGGGTGTCT GTATGGCAAC CCTGACGGCC ATTTTCACGG TTTCACTGCG GGAGCAAATC
GCCCTGTTGT ACAACGACAA TCCCGAGGTT GTAACGCTGG CTGCGCATTT GATGTTGCTG
GCGGCGGTAT ATCAGATTTC TGACTCAATC CAGGTGATTG GCAGTGGGAT TTTGCGTGGT
TATAAAGATA CGCGTTCCAT TTTCTATATT ACCTTTACGG CTTACTGGGT GCTGGGCTTG
CCAAGCGGCT ATATTCTGGC ACTGACCGAT CTGGTCGTTG AACCTATGGG GCCAGCAGGC
TTCTGGATAG GCTTTATTAT TGGCCTGACG TCGGCAGCCA TTATGATGAT GTTGCGTATG
CGGTTCCTGC AACGTCTGCC GTCAGCCATC ATTCTGCAAC GAGCATCCCG CTAA
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| Protein sequence | MQKYISEARL LLALAIPVIL AQIAQTAMGF VDTVMAGGYS ATDMAAVAIG TSIWLPAILF
GHGLLLALTP VIAQLNGSGR RERIAHQVRQ GFWLAGFVSV LIMLVLWNAG YIIRSMENID
PALADKAVGY LRALLWGAPG YLFFQVARNQ CEGLAKTKPG MVMGFIGLLV NIPVNYIFIY
GHFGMPELGG VGCGVATAAV YWVMFLAMVS YIKRARSMRD IRNEKGTAKP DPAVMKRLIQ
LGLPIALALF FEVTLFAVVA LLVSPLGIVD VAGHQIALNF SSLMFVLPMS LAAAVTIRVG
YRLGQGSTLD AQTAARTGLM VGVCMATLTA IFTVSLREQI ALLYNDNPEV VTLAAHLMLL
AAVYQISDSI QVIGSGILRG YKDTRSIFYI TFTAYWVLGL PSGYILALTD LVVEPMGPAG
FWIGFIIGLT SAAIMMMLRM RFLQRLPSAI ILQRASR
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