Gene EcDH1_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1700 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1855449 
End bp1856186 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content53% 
IMG OID 
Productflagellar biosynthetic protein FliP 
Protein accessionACX39361 
Protein GI260448939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000581149 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGTT TATTGTCTGT CGCACCTGTC CTTCTCTGGC TGATTACGCC CCTCGCCTTC 
GCGCAACTGC CGGGTATCAC CAGCCAGCCG CTGCCTGGCG GTGGACAAAG CTGGTCGCTC
CCGGTGCAGA CGCTGGTGTT CATCACCTCG TTGACGTTTA TTCCGGCAAT TTTACTGATG
ATGACCAGTT TCACCCGCAT CATCATTGTT TTTGGTTTAT TGCGTAACGC GCTGGGAACA
CCCTCCGCGC CACCTAACCA GGTATTGCTG GGGCTGGCAC TGTTTTTGAC CTTTTTTATT
ATGTCACCGG TGATCGACAA AATTTATGTA GATGCGTACC AGCCATTCAG CGAAGAGAAA
ATATCAATGC AGGAGGCGCT GGAAAAAGGG GCGCAGCCGC TGCGTGAGTT TATGCTGCGT
CAGACCCGTG AGGCAGATTT AGGGTTGTTT GCCAGACTGG CGAATACCGG CCCGTTGCAG
GGACCTGAAG CCGTGCCGAT GCGCATTTTG CTCCCGGCCT ACGTGACCAG CGAGTTGAAA
ACCGCATTTC AGATAGGCTT CACGATTTTC ATCCCTTTTT TGATTATCGA CCTGGTGATA
GCCAGCGTGT TGATGGCATT GGGGATGATG ATGGTTCCCC CAGCCACCAT TGCTCTGCCC
TTTAAACTGA TGCTGTTTGT ACTGGTGGAT GGCTGGCAAT TGCTGGTCGG TTCGCTGGCG
CAGAGCTTTT ACAGCTAG
 
Protein sequence
MRRLLSVAPV LLWLITPLAF AQLPGITSQP LPGGGQSWSL PVQTLVFITS LTFIPAILLM 
MTSFTRIIIV FGLLRNALGT PSAPPNQVLL GLALFLTFFI MSPVIDKIYV DAYQPFSEEK
ISMQEALEKG AQPLREFMLR QTREADLGLF ARLANTGPLQ GPEAVPMRIL LPAYVTSELK
TAFQIGFTIF IPFLIIDLVI ASVLMALGMM MVPPATIALP FKLMLFVLVD GWQLLVGSLA
QSFYS