Gene EcDH1_0677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0677 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp714532 
End bp715014 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscription activator effector binding protein 
Protein accessionACX38363 
Protein GI260447941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACC TGACACTGGA TGTAAACATT ATCGATTTCC CATCAATACC TGTGGCGATG 
TTGCCGCACC GCTGTAGCCC TGAATTGCTC AACTACAGCG TGGCGAAATT TATCATGTGG
CGTAAAGAGA CGGGGCTTTC TCCTGTTAAC CAAAGCCAGA CTTTTGGCGT CGCCTGGGAC
GACCCTGCCA CCACCGCACC GGAAGCGTTT CGCTTTGATA TCTGCGGCAG CGTTAGCGAA
CCGATTCCCG ATAATCGTTA TGGTGTGAGC AATGGTGAAC TTACCGGTGG ACGTTATGCC
GTGGCCCGCC ACGTTGGCGA GCTGGACGAT ATTTCACACA CGGTATGGGG CATCATTCGC
CACTGGCTGC CTGCAAGCGG CGAGAAAATG CGTAAAGCAC CGATTCTGTT TCACTACACC
AATCTTGCCG AAGGGGTGAC AGAGCAGCGA CTGGAAACGG ATGTTTATGT GCCGTTGGCG
TGA
 
Protein sequence
MTNLTLDVNI IDFPSIPVAM LPHRCSPELL NYSVAKFIMW RKETGLSPVN QSQTFGVAWD 
DPATTAPEAF RFDICGSVSE PIPDNRYGVS NGELTGGRYA VARHVGELDD ISHTVWGIIR
HWLPASGEKM RKAPILFHYT NLAEGVTEQR LETDVYVPLA