Gene EcDH1_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0562 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp594979 
End bp595674 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content44% 
IMG OID 
ProductPili assembly chaperone, N-terminal 
Protein accessionACX38250 
Protein GI260447828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAC GAACATTCGC GGTGATATTA ACCTTGTTGT GTAGCTTCTG TATTGGCCAG 
GCGCTTGCAG GAGGAATCGT TTTACAGCGA ACGCGAGTGA TCTATGATGC CAGCCGCAAA
GAGGCTGCGT TACCTGTCGC AAACAAAGGC GCAGAAACGC CTTATTTACT GCAATCATGG
GTAGATAATA TAGATGGTAA AAGCCGTGCC CCATTTATTA TAACCCCACC GCTATTTCGT
CTTGAGGCTG GCGATGACTC ATCACTGCGA ATTATTAAAA CAGCTGATAA CCTGCCTGAA
AATAAAGAGT CGCTGTTCTA CATTAATGTT CGTGCCATTC CAGCAAAGAA AAAATCAGAT
GATGTTAATG CTAACGAGTT GACGCTGGTA TTTAAAACAC GGATCAAAAT GTTTTATCGC
CCCGCACACC TGAAGGGACG GGTAAACGAT GCGTGGAAAT CACTGGAATT TAAACGTAGT
GACCATTCAC TCAATATATA TAACCCAACT GAATATTACG TCGTATTTGC CGGACTGGCA
GTCGATAAAA CCGATCTCAC AAGCAAAATT GAATATATCG CGCCCGGAGA ACATAAACAG
TTACCACTTC CTGCATCTGG CGGAAAGAAC GTGAAATGGG CTGCGATCAA TGATTATGGC
GGCAGTTCCG GGACAGAAAC TCGTCCACTG CAATAA
 
Protein sequence
MSKRTFAVIL TLLCSFCIGQ ALAGGIVLQR TRVIYDASRK EAALPVANKG AETPYLLQSW 
VDNIDGKSRA PFIITPPLFR LEAGDDSSLR IIKTADNLPE NKESLFYINV RAIPAKKKSD
DVNANELTLV FKTRIKMFYR PAHLKGRVND AWKSLEFKRS DHSLNIYNPT EYYVVFAGLA
VDKTDLTSKI EYIAPGEHKQ LPLPASGGKN VKWAAINDYG GSSGTETRPL Q