Gene EcDH1_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0023 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp22586 
End bp23479 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content44% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionACX37721 
Protein GI260447299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones77 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGAA AATTGCAAAG TTCAGATGTA AAAAACGAAA CTCCGTACAA TATTCCCTTA 
TTGATTAACG AAAATGTGAT CTCCAGCGGA ATTTCTCTGA TCTCGCTCTG GCATACCTAC
GCCGACGAGC ATTACCGGGT GATCTGGCCG CGGGACAAGA AGAAACCGCT TATCGCCAAC
TCATGGGTTG CGGTGTATAC CGTACAAGGA TGTGGGAAAA TTCTTTTAAA GAATGGCGAA
CAAATAACAC TGCATGGCAA CTGTATTATA TTCTTAAAGC CAATGGATAT TCACTCTTAT
CACTGTGAAG GTTTAGTCTG GGAACAGTAC TGGATGGAAT TTACCCCCAC CAGTATGATG
GATATTCCCG TTGGTCAGCA AAGCGTTATT TATAATGGCG AAATTTATAA TCAGGAACTC
ACCGAAGTTG CTGAGTTAAT AACTTCACCA GAAGCAATAA AAAATAATCT GGCAGTCGCT
TTTCTGACGA AAATTATTTA TCAGTGGATT TGTCTTATGT ACGCAGATGG TAAAAAAGAT
CCACAACGGC GGCAAATTGA AAAATTAATT GCCACTTTAC ATGCCAGTCT GCAACAACGC
TGGAGCGTAG CTGATATGGC TGCCACGATC CCCTGTAGCG AAGCCTGGTT GCGTCGTCTG
TTTTTACGCT ATACCGGCAA GACGCCGAAA GAATATTACC TCGATGCGCG TCTGGATCTG
GCGCTATCGC TATTAAAGCA ACAAGGAAAC TCGGTTGGCG AAGTCGCTGA TACGCTCAAC
TTCTTCGACT CCTTTCATTT CAGCAAAGCC TTTAAACATA AATTTGGTTA TGCGCCGTCA
GCCGTGCTAA AGAATACGGA CCAGCACCCA ACGGATGCCA GTCCACACAA TTAA
 
Protein sequence
MNGKLQSSDV KNETPYNIPL LINENVISSG ISLISLWHTY ADEHYRVIWP RDKKKPLIAN 
SWVAVYTVQG CGKILLKNGE QITLHGNCII FLKPMDIHSY HCEGLVWEQY WMEFTPTSMM
DIPVGQQSVI YNGEIYNQEL TEVAELITSP EAIKNNLAVA FLTKIIYQWI CLMYADGKKD
PQRRQIEKLI ATLHASLQQR WSVADMAATI PCSEAWLRRL FLRYTGKTPK EYYLDARLDL
ALSLLKQQGN SVGEVADTLN FFDSFHFSKA FKHKFGYAPS AVLKNTDQHP TDASPHN