Gene ECH_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH_0404 
Symbol 
ID3927516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia chaffeensis str. Arkansas 
KingdomBacteria 
Replicon accessionNC_007799 
Strand
Start bp395626 
End bp396384 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content30% 
IMG OID637901528 
ProductRNA methyltransferase 
Protein accessionYP_507224 
Protein GI88658569 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.106461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAAA ACAAGATATG GATTTACGGT AAACACCCAT GTACCGCTGC TTTACAGAAT 
AAAAATAGAA AATGTCATGA ACTTCTGGTA ACAGAAAATT TTATGAAAAA TAATAATGAA
ATATCCAAAA TTTTAAGATT ATGCAAACAA AAGAATATAA ACTTAAAACA AGTTAATCCT
AATTATATCA ATTCAGTATT ACCACATAAC AGCAATCATC AGGGTATTGC TTTAAAAGCC
TCAGTTATTG ATTCAACAAC AGTAGAAGAG GTATTAAATA CATCCAAAGA AAGTTCAACA
ATAATACTTT TAGATCAAGT TACAGATATT CATAACGTAG GATCCATTAT TAGATCAGCT
GTGTGTTTCA ATGTGGATGC AATTATATTA CCTTACCACA ATTCACCATC TGAAAACTGT
GGTATGTCAA AAACTTCAAG TGGCGCTGTC GATATGATTC CCATTGTATA TGTGATCAAC
ATCGTCAACA CAATAAAGTT ACTCAAAAAA GCAGGATATT GGTGCTATGG ATTTGATGCA
AAAGAAGGAG AATTTCTACA CAAAACAAAA TTGGACAGCA AAAAACTAAT TATCTTTGGA
TCAGAAGATA AAGGGATGCG TAAACTAACA AAAGAAAATT GCGACTTTTT ACTAAAAATT
GCAATATCAA AAAAAATTGA TAGCTTAAAC GTATCAAACG CAGCAGCTGT AGCACTATAT
TCCATTTTTA TACAAAATTA TGACCAAGCA TTGCAATAA
 
Protein sequence
MDKNKIWIYG KHPCTAALQN KNRKCHELLV TENFMKNNNE ISKILRLCKQ KNINLKQVNP 
NYINSVLPHN SNHQGIALKA SVIDSTTVEE VLNTSKESST IILLDQVTDI HNVGSIIRSA
VCFNVDAIIL PYHNSPSENC GMSKTSSGAV DMIPIVYVIN IVNTIKLLKK AGYWCYGFDA
KEGEFLHKTK LDSKKLIIFG SEDKGMRKLT KENCDFLLKI AISKKIDSLN VSNAAAVALY
SIFIQNYDQA LQ