Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH_0366 |
Symbol | |
ID | 3927531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ehrlichia chaffeensis str. Arkansas |
Kingdom | Bacteria |
Replicon accession | NC_007799 |
Strand | - |
Start bp | 356147 |
End bp | 356875 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637901490 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_507186 |
Protein GI | 88657734 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.357183 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAAAAC AATTAGCAGG TAAAGTAGCA ATAATTACAG GTGCTTCTGG AAGCATAGGT TCAGCTGTTG CAAAAAGATT TGCTAAAGAA GGAGCTTGCC TTATCTTAGT AGCTAAGAAT ATTAATAAAT TAAATGCTGT ATATGACTCT ATAAAAGAGT TAGGAGGTGA TGCAATGTTA GCAGCAGTTG ATCTTCAGGA TTTCGATACA ATAAAAAATT TTGCAATGTC TATAGGCAAT AAGTTTAAAA ATATAGATAT ATTAATATTA AACGCAGCAG TGGTAGGAGA TCTTAGCCCT ACACAAGATT ATGAATATGA TACATGGAAA AGGATAATGG ATATAAATTT TATAGCTAAC TGGCATTTAA TAAAATACTT TGATCCATTA CTTAAACTTT CCCCAGCTGG TAGGGTAATT GCTGTTACTT CTGAGGTCAC ACAATCACCA TCTAGATATC CATATTGGAG CACATATGCA TCAAGCAAAG CTGCTTTAGA AACAATGCTA AGAATATATG CTACAGAAAC AAAGCATAGC AAATTATGTG TTAACATGGT ATATCCATCA CTAATGGACA ATGATATATA CGCTCAAGCA CTACCAATAA AAGAAACTGC ACAATCAGTC CTTCCAGAAA ATTTTACTGA CAAATTCATT GAACTATCAT CTAATCAATG CAATGTTACA GGACAGATTT ATAAAATAGG ATCAGAAGAT GAATGCTAG
|
Protein sequence | MEKQLAGKVA IITGASGSIG SAVAKRFAKE GACLILVAKN INKLNAVYDS IKELGGDAML AAVDLQDFDT IKNFAMSIGN KFKNIDILIL NAAVVGDLSP TQDYEYDTWK RIMDINFIAN WHLIKYFDPL LKLSPAGRVI AVTSEVTQSP SRYPYWSTYA SSKAALETML RIYATETKHS KLCVNMVYPS LMDNDIYAQA LPIKETAQSV LPENFTDKFI ELSSNQCNVT GQIYKIGSED EC
|
| |