Gene ECH74115_5799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_5799 
Symbol 
ID6971837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp5432455 
End bp5433306 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content50% 
IMG OID643389428 
ProductHNH nuclease 
Protein accessionYP_002273820 
Protein GI209400044 
COG category[V] Defense mechanisms 
COG ID[COG3440] Predicted restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.249192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA GTAAATCGCT ACAGCAGGCA ATTGCCAACA TAAAAATCTG GCACAAGGGT 
GAACAGCGCG CGCCGCATAA ACCATTGTTA CTGCTATACG TATTAGCGGG ATACCTGAAT
GGACATCCGC GCCTTTTCGA TTATGGCACG GAAATCTACG AACCTCTGCA CAGTTTACTG
GAACGTTTTG GGCCACAGCG TTCACAGTAC CGACCTGATA TGCCGTTCTG GCGATTACAA
GGCGACGGAA TCTGGCAATT ACACAATGCC GAGCGTTGCT CAACAGCAGG GAGCAGCCGA
CAACCGCCAG TGAAGGAACT GAACGAATAC CACGTTGCAG GCGGTTTCGA TGAACAGCAC
TACGCCCTGG TAACCGGCAA TAAAAAACTC ATCAATACTC TGGCGCAACA GATACTCGAA
GCGCACTTCA CCGAGAGTAT TCAGGAAGAA ATCGCTGACG AGCTGGGTTT TGATCTCCAG
CAAACCCGTA AACAGCGCGA CCCGTTATTT CGCAAAAATG TATTACGCGC TTATAACTAC
CAGTGCGCAA TATGTGGCTT TAATATGCGC CACGATGACA CCACCGTCGC GCTGGTAGCG
GCGCATATAA AATGGAAACA GCACGGCGGC CCTTGTGAAA TCCCCAATGG TCTGGCGCTT
TGCGCAATAC ACCATAAAGC CTTTGATAAA GGATCGATTG GCCTGGATGA AAATATGCGG
GTACTGGTCT CGGATGCGGT AAACGGCGGA GGGATCGTTG AGAGATTATT CTGGGATTTT
GACGGGAAAA CTATTGCGTT GCCGCAGGTG CGTAAAAATT ACCCTTATGA GGGGTTTGTG
GGTGAGAGAT AG
 
Protein sequence
MASSKSLQQA IANIKIWHKG EQRAPHKPLL LLYVLAGYLN GHPRLFDYGT EIYEPLHSLL 
ERFGPQRSQY RPDMPFWRLQ GDGIWQLHNA ERCSTAGSSR QPPVKELNEY HVAGGFDEQH
YALVTGNKKL INTLAQQILE AHFTESIQEE IADELGFDLQ QTRKQRDPLF RKNVLRAYNY
QCAICGFNMR HDDTTVALVA AHIKWKQHGG PCEIPNGLAL CAIHHKAFDK GSIGLDENMR
VLVSDAVNGG GIVERLFWDF DGKTIALPQV RKNYPYEGFV GER