Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_5799 |
Symbol | |
ID | 6971837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 5432455 |
End bp | 5433306 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643389428 |
Product | HNH nuclease |
Protein accession | YP_002273820 |
Protein GI | 209400044 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.249192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCA GTAAATCGCT ACAGCAGGCA ATTGCCAACA TAAAAATCTG GCACAAGGGT GAACAGCGCG CGCCGCATAA ACCATTGTTA CTGCTATACG TATTAGCGGG ATACCTGAAT GGACATCCGC GCCTTTTCGA TTATGGCACG GAAATCTACG AACCTCTGCA CAGTTTACTG GAACGTTTTG GGCCACAGCG TTCACAGTAC CGACCTGATA TGCCGTTCTG GCGATTACAA GGCGACGGAA TCTGGCAATT ACACAATGCC GAGCGTTGCT CAACAGCAGG GAGCAGCCGA CAACCGCCAG TGAAGGAACT GAACGAATAC CACGTTGCAG GCGGTTTCGA TGAACAGCAC TACGCCCTGG TAACCGGCAA TAAAAAACTC ATCAATACTC TGGCGCAACA GATACTCGAA GCGCACTTCA CCGAGAGTAT TCAGGAAGAA ATCGCTGACG AGCTGGGTTT TGATCTCCAG CAAACCCGTA AACAGCGCGA CCCGTTATTT CGCAAAAATG TATTACGCGC TTATAACTAC CAGTGCGCAA TATGTGGCTT TAATATGCGC CACGATGACA CCACCGTCGC GCTGGTAGCG GCGCATATAA AATGGAAACA GCACGGCGGC CCTTGTGAAA TCCCCAATGG TCTGGCGCTT TGCGCAATAC ACCATAAAGC CTTTGATAAA GGATCGATTG GCCTGGATGA AAATATGCGG GTACTGGTCT CGGATGCGGT AAACGGCGGA GGGATCGTTG AGAGATTATT CTGGGATTTT GACGGGAAAA CTATTGCGTT GCCGCAGGTG CGTAAAAATT ACCCTTATGA GGGGTTTGTG GGTGAGAGAT AG
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Protein sequence | MASSKSLQQA IANIKIWHKG EQRAPHKPLL LLYVLAGYLN GHPRLFDYGT EIYEPLHSLL ERFGPQRSQY RPDMPFWRLQ GDGIWQLHNA ERCSTAGSSR QPPVKELNEY HVAGGFDEQH YALVTGNKKL INTLAQQILE AHFTESIQEE IADELGFDLQ QTRKQRDPLF RKNVLRAYNY QCAICGFNMR HDDTTVALVA AHIKWKQHGG PCEIPNGLAL CAIHHKAFDK GSIGLDENMR VLVSDAVNGG GIVERLFWDF DGKTIALPQV RKNYPYEGFV GER
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