| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_5540 |
|---|
| Symbol | |
|---|
| ID | 6971000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 5183289 |
|---|
| End bp | 5183942 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643389181 |
|---|
| Product | fibronectin type III domain protein |
|---|
| Protein accession | YP_002273578 |
|---|
| Protein GI | 209396425 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4733] Phage-related protein, tail component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTGG CGCAGGGCAA CCAGATATTC ATGAACGACG TGTTCCTGAA GCGCCTGACG
GCCCCCACCA TTACCAGTGG TGGAAATCCA CCGGCATTTT CCCTGACACC GGATGGAAAG
CTGACTGCTA AAAATGCGGA TATCAGTGGT AACGTGAATG CGAACTCCGG GACGCTCAAC
AACGTCACGA TTAACGAGAA CTGTCGGGTT CTGGGAAAAC TGTCCGCGAA CCAGATTGAA
GGCGATCTCG TTAAAACAGT GGGCAAAGCT TTCCCCCGGG ACTCCCGTGC ACCGGAACGG
TGGCCATCAG GGACCATTAC CGTCAGGGTT TATGACGATC AGCCGTTTGA CCGGCAGATT
GTTATTCCGG CGGTGGCATT CAGTGGCGCT AAGCATGAGA GAGAGCATAC TGATATTTAC
TCCTCATGCC GTCTGATAGT GCGGAAAAAC GGTGCTGAAA TTTATAACCG TACCGCGCTG
GATAATACGC TGATTTACAG TGGCGTTATT GATATGCCTG CCGGTCACGG TCACATGACG
CTGGAGTTTT CGGTGTCAGC ATGGCTGGTA AATGACTGGT ATCCCACAGC AAGTATCAGC
GATTTGCTGG TTGTGGTGAT GAAGAAAGCC ACCGCAGGCA TCAGTATCAG CTGA
|
|---|
| Protein sequence | MFVAQGNQIF MNDVFLKRLT APTITSGGNP PAFSLTPDGK LTAKNADISG NVNANSGTLN
NVTINENCRV LGKLSANQIE GDLVKTVGKA FPRDSRAPER WPSGTITVRV YDDQPFDRQI
VIPAVAFSGA KHEREHTDIY SSCRLIVRKN GAEIYNRTAL DNTLIYSGVI DMPAGHGHMT
LEFSVSAWLV NDWYPTASIS DLLVVVMKKA TAGISIS
|
|---|
| |