| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_4855 |
|---|
| Symbol | dctR |
|---|
| ID | 6971697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 4490873 |
|---|
| End bp | 4491403 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643388545 |
|---|
| Product | transcriptional regulator DctR |
|---|
| Protein accession | YP_002272973 |
|---|
| Protein GI | 209396199 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTTA TAATTACCAG GGATACGATG TTCTTCACCG CGATGAAAAA CATTCTGAGT
AAAGGTAATG TCGTTCATAT ACAGAACGAA GAAGAGATCG ACGTAATGTT GCATCAGAAT
GCCTTCGTCA TTATTGATAC ATTAATGAAT AATGTATTTC ATTCTAATTT TCTCACTCAA
ATTGAACGAT TAAAACCTGT CCATGTCATT ATTTTCTCCC CCTTTAATAT TAAACGCTGC
CTGGGGAAAG TGCCGGTGAC CTTTGTTCCG CGGACTATCA CTATCATTGA TTTTGTCGCA
CTCATCAATG GCAGTTACTG CTCTGTGCCT GAAGCGAATG TGTCACTTTC GCGCAAGCAA
CATCAGGTTC TGAGCTGCAT TGCGAATCAA ATGACAACGG AAGATATTCT GGAGAAACTG
AAAATATCGC TAAAAACGTT CTACTGCCAT AAACACAATA TCATGATGAT CCTCAATCTT
AAGCGGATCA ATGAGCTGGT ACGCCATCAG CATATTGATT ATCTGGTGTG A
|
|---|
| Protein sequence | MFLIITRDTM FFTAMKNILS KGNVVHIQNE EEIDVMLHQN AFVIIDTLMN NVFHSNFLTQ
IERLKPVHVI IFSPFNIKRC LGKVPVTFVP RTITIIDFVA LINGSYCSVP EANVSLSRKQ
HQVLSCIANQ MTTEDILEKL KISLKTFYCH KHNIMMILNL KRINELVRHQ HIDYLV
|
|---|
| |