Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4575 |
Symbol | panF |
ID | 6970874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4244334 |
End bp | 4245785 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643388285 |
Product | sodium/panthothenate symporter |
Protein accession | YP_002272720 |
Protein GI | 209399022 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4145] Na+/panthothenate symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000690231 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.130163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTTG AAGTAATTCT ACCGCTGGTC GCCTATCTGG TGGTGGTGTT CGGTATCTCG GTTTATGCGA TGCGTAAACG GAGCACCGGC ACCTTCCTTA ATGAGTATTT CCTCGGCAGC CGCTCTATGG GCGGTATTGT GCTGGCGATG ACGCTCACCG CGACTTATAT CAGTGCCAGT TCGTTTATCG GCGGGCCTGG AGCTGCTTAC AAATACGGCC TTGGCTGGGT ATTGCTGGCG ATGATTCAGC TTCCGGCAGT CTGGCTTTCA CTCGGTATTC TCGGCAAGAA GTTTGCGATT CTTGCGCGCC GCTACAATGC AGTGACGCTG AACGATATGC TGTTTGCCCG CTACCAGAGT CGTCTTCTGG TGTGGCTGGC GAGTTTGAGT TTGCTGGTTG CGTTCGTTGG TGCGATGACC GTGCAGTTTA TCGGCGGTGC GCGCCTGCTG GAAACCGCGG CGGGTATTCC TTATGAAACC GGGCTGCTGA TTTTTGGTAT CAGCATTGCG TTATATACCG CCTTTGGTGG CTTTCGCGCC AGCGTGCTGA ACGACACCAT GCAAGGGCTT GTGATGCTGA TTGGCACCGT TGTGCTGCTT ATTGGCGTGG TACATGCCGC TGGCGGCTTA AGCAACGCAG TACAGACCTT GCAAACCATC GATCCGCAAC TGGTTACGCC ACAAGGCGCT GACGATATTC TGTCGCCTGC CTTTATGACG TCGTTCTGGG TACTGGTGTG CTTTGGCGTT ATAGGCCTGC CGCATACTGC GGTGCGCTGT ATCTCTTATA AAGACAGCAA AGCAGTACAC CGGGGGATCA TCATCGGTAC GATTGTAGTC GCAATCCTGA TGTTCGGTAT GCACCTAGCC GGAGCGTTAG GTCGTGCAGT GATCCCCGAT CTCACCGTAC CGGATCTGGT GATCCCGACG TTAATGGTAA AAGTGCTGCC ACCGTTTGCT GCCGGGATCT TTCTGGCTGC ACCTATGGCT GCGATCATGT CGACAATTAA CGCCCAATTG CTACAAAGTT CCGCTACGAT CATTAAAGAT CTCTATCTGA ATATCCGTCC GGATCAAATG CAAAACGAGA CGCGTCTGAA GCGGATGTCG GCGGTAATTA CGTTAGTTCT CGGCGCGTTG CTGCTGCTTG CCGCCTGGAA GCCGCCAGAA ATGATCATCT GGCTGAATTT GCTGGCCTTC GGTGGGCTGG AAGCCGTTTT CCTGTGGCCG CTGGTGCTGG GTCTTTACTG GGAACGCGCC AACGCCAAAG GCGCGCTAAG TGCGATGATC GTTGGCGGCG TGCTGTATGC CGTACTCGCG ACGCTGAATA TTCAGTACCT GGGCTTCCAC CCTATCGTGC CCTCGTTACT ACTAAGTTTG CTGGCTTTCC TGGTCGGAAA CCGTTTCGGT ACATCCGTCC CGCAAGCTAC CGTTTTGACT ACTGATAAAT AA
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Protein sequence | MQLEVILPLV AYLVVVFGIS VYAMRKRSTG TFLNEYFLGS RSMGGIVLAM TLTATYISAS SFIGGPGAAY KYGLGWVLLA MIQLPAVWLS LGILGKKFAI LARRYNAVTL NDMLFARYQS RLLVWLASLS LLVAFVGAMT VQFIGGARLL ETAAGIPYET GLLIFGISIA LYTAFGGFRA SVLNDTMQGL VMLIGTVVLL IGVVHAAGGL SNAVQTLQTI DPQLVTPQGA DDILSPAFMT SFWVLVCFGV IGLPHTAVRC ISYKDSKAVH RGIIIGTIVV AILMFGMHLA GALGRAVIPD LTVPDLVIPT LMVKVLPPFA AGIFLAAPMA AIMSTINAQL LQSSATIIKD LYLNIRPDQM QNETRLKRMS AVITLVLGAL LLLAAWKPPE MIIWLNLLAF GGLEAVFLWP LVLGLYWERA NAKGALSAMI VGGVLYAVLA TLNIQYLGFH PIVPSLLLSL LAFLVGNRFG TSVPQATVLT TDK
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