Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_4453 |
Symbol | |
ID | 6969717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 4126599 |
End bp | 4127753 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643388173 |
Product | putative sugar isomerase, AgaS family |
Protein accession | YP_002272610 |
Protein GI | 209400641 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2222] Predicted phosphosugar isomerases |
TIGRFAM ID | [TIGR02815] putative sugar isomerase, AgaS family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.24237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGAAA ATTACACCCC TGCTGCCGCC GCAACCGGTA CATGGACTGA AGAAGAGATC CGCCATCAGC CTCGCGCATG GATCCGTTCG CTCACCAACA TCGACGCGCT ACATTCCGCG CTTAATAACT TCCTTGAACC GTTACTGCGC AAAGAGAATC TGCGGATCAT CCTGACCGGA GCCGGAACCT CGGCATTTAT CGGTGACATC ATCGCGCCGT GGCTCGCCAG CCATACCGGT AAAAACTTCA GCGCCGTACC GACCACCGAT CTGGTCACTA ATCCGATGGA CTACCTGAAC CCAGCCCATC CGCTGCTGTT GATCTCCTTC GGTCGATCCG GCAACAGCCC GGAAAGCGTC GCAGCCGTGG AACTGGCAAA TCAATTTGTA CCGGAATGCT ATCACCTGCC GATCACCTGC AACGAAGCGG GCGCTCTTTA CCAAAACGCG ATCAACAGCG ATAACGCGTT TGCCGTGCTG ATGCCCGCAG AAACGCACGA TCGCGGCTTT GCGATGACCA GCAGCATTAC CACCATGATG GCCAGCTGCC TCGCGGTTTT CGCACCTGAG ACGATCAACA GCCAAACCTT CCGCGACGTG GCGGATCGTT GCCAGGCGAT CCTGACCTCA CTGGGCGATT TCAGCGAAGG TGTGTTTGGT TACGCACCGT GGAAACGGAT CGTTTATCTC GGCAGCGGTG GCTTACAGGG CGCAGCACGC GAGTCGGCGC TGAAAGTGCT GGAACTGACG GCGGGTAAAC TGGCGGCCTT TTATGATTCT CCAACCGGAT TCCGTCATGG ACCAAAATCG CTGGTCGATA ACGAAACACT GGTGGTGGTA TTTGTCTCCA GCCACCCTTA CACCCGTCAG TATGATCTTG ATCTGCTGGC TGAACTTCAC CGTGACAACC AGGCAATGCG TGTAATCGCC ATCGCCGCGG AAAGCAGCGA CATCGTCGCT GCCGGTCCAC ATATCATCCT GCCACCGTCA CGTCACTTTA TCGACGTTGA GCAGGCATTT TGCTTCCTGA TGTACGCCCA GACGTTTGCA CTGATGCAGT CGCTGCACAT GGGCAATACG CCGGATACCC CATCAGCCAG TGGCACCGTT AACCGCGTGG TGCAAGGCGT AATCATTCAT CCGTGGCAGG CATAA
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Protein sequence | MPENYTPAAA ATGTWTEEEI RHQPRAWIRS LTNIDALHSA LNNFLEPLLR KENLRIILTG AGTSAFIGDI IAPWLASHTG KNFSAVPTTD LVTNPMDYLN PAHPLLLISF GRSGNSPESV AAVELANQFV PECYHLPITC NEAGALYQNA INSDNAFAVL MPAETHDRGF AMTSSITTMM ASCLAVFAPE TINSQTFRDV ADRCQAILTS LGDFSEGVFG YAPWKRIVYL GSGGLQGAAR ESALKVLELT AGKLAAFYDS PTGFRHGPKS LVDNETLVVV FVSSHPYTRQ YDLDLLAELH RDNQAMRVIA IAAESSDIVA AGPHIILPPS RHFIDVEQAF CFLMYAQTFA LMQSLHMGNT PDTPSASGTV NRVVQGVIIH PWQA
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